RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 BRMS1Q9HCU9 246 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 MRPL40Q9NQ50 206 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 ST7Q9NRC1 585 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 DDX56Q9NY93 547 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 DDX25Q9UHL0 483 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 CYTH4Q9UIA0 394 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 LSM7Q9UK45 103 aaKnown RBP6.68□□□□□ -1.34
HERC1-208ENST00000560462 DDX19BQ9UMR2 479 aa6.68□□□□□ -1.34
HERC1-208ENST00000560462 A0A1B0GUH1 482 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 E7EWF7 191 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 ABLIM1O14639 778 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 DPM1O60762 260 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 PENKP01210 267 aaPredicted RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 PROZP22891 400 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 ACAT1P24752 427 aaKnown RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 CHMLP26374 656 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 MAP4P27816 1152 aaKnown RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 CLCQ05315 142 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 TCEA2Q15560 299 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 CCDC142Q17RM4 750 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 SETMARQ53H47 684 aaPredicted RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 SPATA1Q5VX52 437 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 TDRD10Q5VZ19 366 aaKnown RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 ESRP1Q6NXG1 681 aaKnown RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 VSTM1Q6UX27 236 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 CATSPER3Q86XQ3 398 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 CEP97Q8IW35 865 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 NLGN4XQ8N0W4 816 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 CISD2Q8N5K1 135 aaKnown RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 ST6GALNAC3Q8NDV1 305 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 PDZD8Q8NEN9 1154 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 NLGN4YQ8NFZ3 816 aaPredicted RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 CYB5D2Q8WUJ1 264 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 ITLN2Q8WWU7 325 aaPredicted RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 C18orf12Q96KH6 178 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 IFT74Q96LB3 600 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 PKMYT1Q99640 499 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 CCSER1Q9C0I3 900 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 MUC3BQ9H195 1237 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 NUCKS1Q9H1E3 243 aaKnown RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 RBSNQ9H1K0 784 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 LRRN3Q9H3W5 708 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 RBM28Q9NW13 759 aaKnown RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 ORC3Q9UBD5 711 aaPredicted RBP6.67□□□□□ -1.34
HERC1-208ENST00000560462 ABCA4P78363 2273 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 CITO14578 2027 aa6.67□□□□□ -1.34
HERC1-208ENST00000560462 MYH10P35580 1976 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 A6NCN8 305 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 FAM171A2A8MVW0 826 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 PIRO00625 290 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 INPP4BO15327 924 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 PRC1O43663 620 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 SLC37A4O43826 429 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 BNIP3LO60238 219 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 RNGTTO60942 597 aaKnown RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 SMNDC1O75940 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
HERC1-208ENST00000560462 CSF2P04141 144 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 CYP21A2P08686 494 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 INHBBP09529 407 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 NME1P15531 152 aaKnown RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 GOT1P17174 413 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 ARNTP27540 789 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 SLC8A1P32418 973 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 RABIFP47224 123 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 MASP1P48740 699 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 TAF6P49848 677 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 GOLGA8FQ08AF8 430 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 GOLGA8DPQ0D2H9 430 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 C16orf72Q14CZ0 275 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 PFKFB3Q16875 520 aaPredicted RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 ARHGAP44Q17R89 818 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 FYB2Q5VWT5 728 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 MOXD1Q6UVY6 613 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 C4orf50Q6ZRC1 276 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 KDELC2Q7Z4H8 507 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 APLFQ8IW19 511 aaPredicted RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 SULF2Q8IWU5 870 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 MB21D2Q8IYB1 491 aaPredicted RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 SLC22A18ASQ8N1D0 253 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 TAB3Q8N5C8 712 aaPredicted RBP6.66□□□□□ -1.34
HERC1-208ENST00000560462 AADATQ8N5Z0 425 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 TMEM145Q8NBT3 493 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 CCDC112Q8NEF3 446 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 LMX1AQ8TE12 382 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 TMEM158Q8WZ71 300 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 RILPL2Q969X0 211 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 GAL3ST3Q96A11 431 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 FEM1CQ96JP0 617 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 SLC30A3Q99726 388 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 TM9SF2Q99805 663 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 MYOCQ99972 504 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 MTA3Q9BTC8 594 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 ASPSCR1Q9BZE9 553 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 TNKS2Q9H2K2 1166 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 RASSF4Q9H2L5 321 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 MLXIPLQ9NP71 852 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 DIAPH3Q9NSV4 1193 aa6.66□□□□□ -1.34
HERC1-208ENST00000560462 DDX43Q9NXZ2 648 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms