RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 OR2T34Q8NGX1 318 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 GRIN3AQ8TCU5 1115 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 FAM131CQ96AQ9 280 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 ARRDC3Q96B67 414 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 ARHGEF26Q96DR7 871 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 SNRNP25Q9BV90 132 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 THAP2Q9H0W7 228 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 MAGEH1Q9H213 219 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 DHX35Q9H5Z1 703 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 AP4E1Q9UPM8 1137 aa11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 BZW2Q9Y6E2 419 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-216ENST00000560243 TP53BP1Q12888 1972 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 LRRC72A6NJI9 287 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 KPNA3O00505 521 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 KCNK3O14649 394 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 LRCH4O75427 683 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 GJB3O75712 270 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 SYPP08247 313 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 MYBL1P10243 752 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 CD59P13987 128 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 GKP32189 559 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 AIF1P55008 147 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 TAS2R38P59533 333 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 SLC20A2Q08357 652 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 POLD3Q15054 466 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 PIP5KL1Q5T9C9 394 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 N4BP2L1Q5TBK1 243 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 FAM46CQ5VWP2 391 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 DEFB124Q8NES8 71 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 OR6K2Q8NGY2 324 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 FNIP1Q8TF40 1166 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 VOPP1Q96AW1 172 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 IQCDQ96DY2 449 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 TRIM11Q96F44 468 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 HMCESQ96FZ2 354 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 BTBD6Q96KE9 485 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 SLC6A18Q96N87 628 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 KCTD15Q96SI1 283 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 EPAS1Q99814 870 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 TM6SF2Q9BZW4 377 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 NENFQ9UMX5 172 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 WASF2Q9Y6W5 498 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 SPEGQ15772 3267 aa11.88□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3DA0A087WVF3 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3IA0A087WXS9 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3EA0A087X179 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3KA0A087X1G2 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 A0A1W2PPC4 97 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3FA6NER0 549 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 WASH4PA8MWX3 477 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3LB9A6J9 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 RASA4BC9J798 803 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 C1QTNF3-AMACRE9PGA6 284 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 RASA4O43374 803 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 PLRG1O43660 514 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 KDELR3O43731 214 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 OPHN1O60890 802 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 LEFTY1O75610 366 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 RNF8O76064 485 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3HP0C7X1 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 IL1R2P27930 398 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 MAT2AP31153 395 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 HNRNPH3P31942 346 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 ETFBP38117 255 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 CCR5P51681 352 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 AFF3P51826 1226 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 CCNHP51946 323 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TPI1P60174 286 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 KIF19Q2TAC6 998 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 CARD16Q5EG05 197 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 ERMARDQ5T6L9 678 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3GQ6DHY5 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3CQ6IPX1 549 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 ALKBH5Q6P6C2 394 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 PIP4P1Q86T03 277 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 CPNE8Q86YQ8 564 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TBC1D3Q8IZP1 549 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 PCDH20Q8N6Y1 951 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 TMIEQ8NEW7 156 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 CAMK1GQ96NX5 476 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 CEP44Q9C0F1 390 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 RETREG1Q9H6L5 497 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 MRPL47Q9HD33 250 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 OSGEPQ9NPF4 335 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 IL36AQ9UHA7 158 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 FNDC3AQ9Y2H6 1198 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 SNX11Q9Y5W9 270 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 SCINQ9Y6U3 715 aa11.87□□□□□ -0.51
RABGGTA-216ENST00000560243 AKAP13Q12802 2813 aa11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 EEF2KO00418 725 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-216ENST00000560243 SLC7A4O43246 635 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms