RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SNAP91O60641 907 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 FOSL2P15408 326 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 NFKB1P19838 968 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 MMP13P45452 471 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 RFTN1Q14699 578 aaPredicted RBP12.41□□□□□ -0.42
HERC1-205ENST00000559886 PLEKHG6Q3KR16 790 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 BEND6Q5SZJ8 279 aaPredicted RBP12.41□□□□□ -0.42
HERC1-205ENST00000559886 LEKR1Q6ZMV7 388 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 DEFB123Q8N688 67 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 CAVIN3Q969G5 261 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 ACDQ96AP0 544 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 GORASP1Q9BQQ3 440 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 FOXP3Q9BZS1 431 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 GLOD4Q9HC38 313 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 HPS4Q9NQG7 708 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 UBA2Q9UBT2 640 aaPredicted RBP12.41□□□□□ -0.42
HERC1-205ENST00000559886 VPS51Q9UID3 782 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 INTS6Q9UL03 887 aaKnown RBP12.41□□□□□ -0.42
HERC1-205ENST00000559886 KIAA1549LQ6ZVL6 1849 aa12.41□□□□□ -0.42
HERC1-205ENST00000559886 OTOL1A6NHN0 477 aaPredicted RBP12.4□□□□□ -0.42
HERC1-205ENST00000559886 ANHXE9PGG2 379 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 MBTPS2O43462 519 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 NEBLO76041 1014 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 TMEM63AO94886 807 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 CD160O95971 181 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 APRTP07741 180 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 TPSB2P20231 275 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 GRM2Q14416 872 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 SKIV2LQ15477 1246 aaKnown RBP12.4□□□□□ -0.42
HERC1-205ENST00000559886 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
HERC1-205ENST00000559886 KLHDC8BQ8IXV7 354 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 YAF2Q8IY57 180 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 ZCCHC9Q8N567 271 aaKnown RBP12.4□□□□□ -0.42
HERC1-205ENST00000559886 FCRL5Q96RD9 977 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 RPP25Q9BUL9 199 aaKnown RBP12.4□□□□□ -0.42
HERC1-205ENST00000559886 ECT2Q9H8V3 914 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 ARFGAP3Q9NP61 516 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 EIF2B3Q9NR50 452 aaKnown RBP12.4□□□□□ -0.42
HERC1-205ENST00000559886 ACTL7AQ9Y615 435 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 CXorf51AA0A1B0GTR3 108 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 E7EVH7 732 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 CDK16Q00536 496 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 HTR4Q13639 388 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 GAB4Q2WGN9 574 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 PITRM1Q5JRX3 1037 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 PGBD5Q8N414 524 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
HERC1-205ENST00000559886 NAT16Q8N8M0 369 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 XPO6Q96QU8 1125 aaKnown RBP12.4□□□□□ -0.42
HERC1-205ENST00000559886 TSPYL1Q9H0U9 437 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 NT5MQ9NPB1 228 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
HERC1-205ENST00000559886 F5H423 210 aaPredicted RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 DMC1Q14565 340 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 FUT11Q495W5 492 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 INO80DQ53TQ3 878 aaPredicted RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 HABP4Q5JVS0 413 aaKnown RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 SYCP2LQ5T4T6 812 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 RETSATQ6NUM9 610 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 ETFBKMTQ8IXQ9 262 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 BBS5Q8N3I7 341 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 MCUQ8NE86 351 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 PPP1R2P1Q96PQ5 205 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 PSKH2Q96QS6 385 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 TRMT61BQ9BVS5 477 aaKnown RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 SLC25A51Q9H1U9 297 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 SEPT3Q9UH03 358 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 TTLL3Q9Y4R7 772 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 NUMBLQ9Y6R0 609 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 ERI2A8K979 691 aaKnown RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 CISD3P0C7P0 127 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 GEMIN4P57678 1058 aaKnown RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 RUNX3Q13761 415 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 ZNF235Q14590 738 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 CYTH1Q15438 398 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 KCTD11Q693B1 232 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 ALG1LQ6GMV1 187 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 PDCD7Q8N8D1 485 aaKnown RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 TSEN2Q8NCE0 465 aaKnown RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 PPM1EQ8WY54 764 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 HLA-CQ95604 372 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 OXNAD1Q96HP4 312 aaPredicted RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 GDAP1L1Q96MZ0 367 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 PWWP2AQ96N64 755 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 MLPHQ9BV36 600 aaPredicted RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 FRMD8Q9BZ67 464 aaPredicted RBP12.39□□□□□ -0.43
HERC1-205ENST00000559886 HAUS2Q9NVX0 235 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 ANKRD36A6QL64 1941 aa12.39□□□□□ -0.43
HERC1-205ENST00000559886 GOLGA8MH3BSY2 632 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 MUSKO15146 869 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 ANXA9O76027 345 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 AP2A1O95782 977 aa12.38□□□□□ -0.43
HERC1-205ENST00000559886 SP100P23497 879 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms