RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CEP44Q9C0F1 390 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 MAGEH1Q9H213 219 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 TNKS2Q9H2K2 1166 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 TSPY26PQ9H489 355 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 NOL6Q9H6R4 1146 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 TM9SF3Q9HD45 589 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 AP4E1Q9UPM8 1137 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 LUC7L2Q9Y383 392 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 ACTL7AQ9Y615 435 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 BZW2Q9Y6E2 419 aaKnown RBP11.18□□□□□ -0.62
SPG11-216ENST00000559347 ASPMQ8IZT6 3477 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 LRRK1Q38SD2 2015 aa11.18□□□□□ -0.62
SPG11-216ENST00000559347 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CEP295Q9C0D2 2601 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 AKAP13Q12802 2813 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 A0A1W2PPC4 97 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 UPK3BL1B0FP48 263 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 UPK3BL2E5RIL1 263 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 RNF103O00237 685 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 GIPC1O14908 333 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 FGF10O15520 208 aaPredicted RBP11.17□□□□□ -0.62
SPG11-216ENST00000559347 LATO43561 262 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CREB3O43889 395 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 LRCH4O75427 683 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CER1O95813 267 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 TPM3P06753 285 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CASP14P31944 242 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CHRNA3P32297 505 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CCR5P51681 352 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CNTN1Q12860 1018 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 PIP5KL1Q5T9C9 394 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 LAYNQ6UX15 382 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.17□□□□□ -0.62
SPG11-216ENST00000559347 DPY19L3Q6ZPD9 716 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 PIP4P1Q86T03 277 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 VPS36Q86VN1 386 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CHST14Q8NCH0 376 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 DEFB124Q8NES8 71 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 TMIEQ8NEW7 156 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 OR14C36Q8NHC7 312 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 GRIN3AQ8TCU5 1115 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 CPLX3Q8WVH0 158 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 ARRDC3Q96B67 414 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 EBF2Q9HAK2 575 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 GPATCH2LQ9NWQ4 482 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 MYO1AQ9UBC5 1043 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 IL36AQ9UHA7 158 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 FCF1Q9Y324 198 aaKnown RBP11.17□□□□□ -0.62
SPG11-216ENST00000559347 WASF2Q9Y6W5 498 aa11.17□□□□□ -0.62
SPG11-216ENST00000559347 COL5A1P20908 1838 aaPredicted RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 CHD8Q9HCK8 2581 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 A0A087X0T9 212 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 A0A1B0GVT2 93 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 WASH4PA8MWX3 477 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 EIF3CLB5ME19 914 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 KPNA3O00505 521 aaPredicted RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 PRNPP04156 253 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 FAM228BP0C875 321 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 CD59P13987 128 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 HTR7P34969 479 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 RECQLP46063 649 aaPredicted RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 CSNK1EP49674 416 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 CCNHP51946 323 aaPredicted RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 GEMIN4P57678 1058 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 TAS2R38P59533 333 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 TPI1P60174 286 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 RACK1P63244 317 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 SLC20A2Q08357 652 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 POLD3Q15054 466 aaPredicted RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 TEAD4Q15561 434 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 CA9Q16790 459 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 N4BP2L1Q5TBK1 243 aaPredicted RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 TRIM69Q86WT6 500 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 ISG20Q96AZ6 181 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 SLC6A18Q96N87 628 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 EIF3CQ99613 913 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPG11-216ENST00000559347 TM6SF2Q9BZW4 377 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 THAP2Q9H0W7 228 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 CATSPERBQ9H7T0 1116 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 IL21RQ9HBE5 538 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 TPX2Q9ULW0 747 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 FNDC3AQ9Y2H6 1198 aaKnown RBP11.16□□□□□ -0.62
SPG11-216ENST00000559347 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPG11-216ENST00000559347 TRPM6Q9BX84 2022 aa11.16□□□□□ -0.62
SPG11-216ENST00000559347 TBC1D3DA0A087WVF3 549 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 TBC1D3IA0A087WXS9 549 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 TBC1D3EA0A087X179 549 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 TBC1D3KA0A087X1G2 549 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 TBC1D3FA6NER0 549 aaPredicted RBP11.15□□□□□ -0.62
SPG11-216ENST00000559347 ZSCAN5CA6NGD5 496 aaPredicted RBP11.15□□□□□ -0.62
SPG11-216ENST00000559347 TBC1D3LB9A6J9 549 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 CBFA2T2O43439 604 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 KDELR3O43731 214 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 PRPSAP2O60256 369 aa11.15□□□□□ -0.62
SPG11-216ENST00000559347 LEFTY1O75610 366 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms