RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 PRPF39Q86UA1 669 aaKnown RBP17.97■□□□□ 0.47
SMAD3-210ENST00000559092 TRIM69Q86WT6 500 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 NAXDQ8IW45 347 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 SYN2Q92777 582 aaPredicted RBP17.97■□□□□ 0.47
SMAD3-210ENST00000559092 HDAC8Q9BY41 377 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 EBF2Q9HAK2 575 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 IL21RQ9HBE5 538 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 PREBQ9HCU5 417 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 NDFIP2Q9NV92 336 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 DONSONQ9NYP3 566 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 IL36AQ9UHA7 158 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 FZD10Q9ULW2 581 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 DMTF1Q9Y222 760 aa17.97■□□□□ 0.47
SMAD3-210ENST00000559092 TMEM191CA6NGB0 347 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 ZSCAN5CA6NGD5 496 aaPredicted RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 TMCO5BA8MYB1 307 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 EIF3CLB5ME19 914 aaKnown RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 EPHB2P29323 1055 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 ACVRL1P37023 503 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 PBX1P40424 430 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 C21orf59P57076 290 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 SIM1P81133 766 aaPredicted RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 POLD3Q15054 466 aaPredicted RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 ZNF423Q2M1K9 1284 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 SLC45A4Q5BKX6 768 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 CARD16Q5EG05 197 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 DPY19L3Q6ZPD9 716 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 TMC6Q7Z403 805 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 RTL3Q8N8U3 475 aaKnown RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 FNIP1Q8TF40 1166 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 TRIM11Q96F44 468 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 SERAC1Q96JX3 654 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 EIF3CQ99613 913 aaKnown RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 EPAS1Q99814 870 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 MAGEB5Q9BZ81 275 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 DYRK4Q9NR20 520 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 ARHGAP20Q9P2F6 1191 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 DNAI1Q9UI46 699 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 FNDC3AQ9Y2H6 1198 aaKnown RBP17.96■□□□□ 0.47
SMAD3-210ENST00000559092 PCDHB9Q9Y5E1 797 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 ACACBO00763 2458 aa17.96■□□□□ 0.47
SMAD3-210ENST00000559092 ASCC3Q8N3C0 2202 aaKnown RBP17.95■□□□□ 0.46
SMAD3-210ENST00000559092 TPRP12270 2363 aaKnown RBP17.95■□□□□ 0.46
SMAD3-210ENST00000559092 WASH4PA8MWX3 477 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 KPNA3O00505 521 aaPredicted RBP17.95■□□□□ 0.46
SMAD3-210ENST00000559092 DDX3XO00571 662 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMAD3-210ENST00000559092 KDELR3O43731 214 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 TRIM16O95361 564 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 CD160O95971 181 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 MYBL1P10243 752 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 CD38P28907 300 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 YBEYP58557 167 aaPredicted RBP17.95■□□□□ 0.46
SMAD3-210ENST00000559092 OGDHQ02218 1023 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 TRIP6Q15654 476 aaKnown RBP17.95■□□□□ 0.46
SMAD3-210ENST00000559092 ZSCAN23Q3MJ62 389 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 ARSIQ5FYB1 569 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 PIP5KL1Q5T9C9 394 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 GLRX5Q86SX6 157 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 CHST14Q8NCH0 376 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 PPP1R16AQ96I34 528 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 LRIG1Q96JA1 1093 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 SLC6A18Q96N87 628 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 CNTNAP3BQ96NU0 1288 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 NCAPGQ9BPX3 1015 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 HEPHQ9BQS7 1158 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 CNTNAP3Q9BZ76 1288 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 TNKS2Q9H2K2 1166 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 CATSPERBQ9H7T0 1116 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 WASF3Q9UPY6 502 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 CEP192Q8TEP8 1941 aa17.95■□□□□ 0.46
SMAD3-210ENST00000559092 SPAARA0A1B0GVQ0 90 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 A0A1W2PR77 199 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 PLK4O00444 970 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 FGF10O15520 208 aaPredicted RBP17.94■□□□□ 0.46
SMAD3-210ENST00000559092 FLRT2O43155 660 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 PCDHGA12O60330 932 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 RNGTTO60942 597 aaKnown RBP17.94■□□□□ 0.46
SMAD3-210ENST00000559092 CBFA2T3O75081 653 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 PSMA2P25787 234 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 TAS2R38P59533 333 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 ZBED6P86452 979 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 OVGP1Q12889 678 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 POM121L1PQ3SYA9 428 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 SETMARQ53H47 684 aaPredicted RBP17.94■□□□□ 0.46
SMAD3-210ENST00000559092 NAPEPLDQ6IQ20 393 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 ERN2Q76MJ5 926 aaKnown RBP17.94■□□□□ 0.46
SMAD3-210ENST00000559092 IQCHQ86VS3 1027 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 PSTKQ8IV42 348 aaKnown RBP17.94■□□□□ 0.46
SMAD3-210ENST00000559092 PYROXD2Q8N2H3 581 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 MFSD2AQ8NA29 543 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 CASKIN2Q8WXE0 1202 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 ISCUQ9H1K1 167 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 MRPL47Q9HD33 250 aaKnown RBP17.94■□□□□ 0.46
SMAD3-210ENST00000559092 AASDHPPTQ9NRN7 309 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 PCOLCE2Q9UKZ9 415 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 CAPN11Q9UMQ6 739 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 SCINQ9Y6U3 715 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 WASF2Q9Y6W5 498 aa17.94■□□□□ 0.46
SMAD3-210ENST00000559092 CEP295Q9C0D2 2601 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms