RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 CD160O95971 181 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 APOC2P02655 101 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 SRPRAP08240 638 aaKnown RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 CHRM1P11229 460 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 HNRNPLP14866 589 aaKnown RBP eCLIP12.66□□□□□ -0.382e-7■■■■□ 24.6
GABPB1-208ENST00000558970 PTPN7P35236 360 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 PXNP49023 591 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 PTPN5P54829 565 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 EIF3EP60228 445 aaKnown RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 RHOAP61586 193 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 IL10RBQ08334 325 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 SLC10A7Q0GE19 358 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 SNX1Q13596 522 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 STARD3Q14849 445 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 PDK1Q15118 436 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 KCTD19Q17RG1 926 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 EOGTQ5NDL2 527 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 ATXN7L2Q5T6C5 722 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 NYAP1Q6ZVC0 841 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 SYNPOQ8N3V7 929 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 C1orf54Q8WWF1 131 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 CLDN23Q96B33 292 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 OLFM3Q96PB7 478 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 CINPQ9BW66 212 aaPredicted RBP12.66□□□□□ -0.38
GABPB1-208ENST00000558970 OSBPL6Q9BZF3 934 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 PDFQ9HBH1 243 aa12.66□□□□□ -0.38
GABPB1-208ENST00000558970 TCRBV21S2A2A0A5A6 115 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 F5H423 210 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 MCF2LO15068 1137 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 SIN3BO75182 1162 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 GJB3O75712 270 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 MX2P20592 715 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 RPS9P46781 194 aaKnown RBP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 CLCN5P51795 746 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 GEMIN4P57678 1058 aaKnown RBP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 MAXP61244 160 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 ITKQ08881 620 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 KLF1Q13351 362 aaPredicted RBP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 ZNF235Q14590 738 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 LBRQ14739 615 aaKnown RBP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 NOMO1Q15155 1222 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 POM121L1PQ3SYA9 428 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 DARS2Q6PI48 645 aaKnown RBP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 TSSK4Q6SA08 328 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 ZSCAN30Q86W11 494 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 PGBD3Q8N328 593 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 GRIN3AQ8TCU5 1115 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 NSMCE1Q8WV22 266 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 TFB1MQ8WVM0 346 aaKnown RBP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 HDAC11Q96DB2 347 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 PBKQ96KB5 322 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 AP1M1Q9BXS5 423 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 TMEM245Q9H330 911 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 NT5MQ9NPB1 228 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 DLGAP2Q9P1A6 1054 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 BCCIPQ9P287 314 aaKnown RBP eCLIP12.65□□□□□ -0.38
GABPB1-208ENST00000558970 SLC8A2Q9UPR5 921 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 HS3ST2Q9Y278 367 aa12.65□□□□□ -0.38
GABPB1-208ENST00000558970 PTPRZ1P23471 2315 aaPredicted RBP12.65□□□□□ -0.39
GABPB1-208ENST00000558970 EDDM13A0A1B0GTR0 161 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 ZSCAN5CA6NGD5 496 aaPredicted RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 ATP9BO43861 1147 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 ATG13O75143 517 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 RBP3P10745 1247 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 CCNCP24863 283 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 RBL1P28749 1068 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 GKP32189 559 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 MMP13P45452 471 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 RGRP47804 291 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 NR2C2P49116 596 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 CLCN6P51797 869 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 NRLP54845 237 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 PPIDQ08752 370 aaKnown RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 ZBTB17Q13105 803 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 CYTH1Q15438 398 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 CRY1Q16526 586 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 HNRNPA1L2Q32P51 320 aaKnown RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 HEATR6Q6AI08 1181 aaKnown RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 ANO7Q6IWH7 933 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 TIGD7Q6NT04 549 aaPredicted RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
GABPB1-208ENST00000558970 CHST14Q8NCH0 376 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 TSTD1Q8NFU3 115 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 FRS2Q8WU20 508 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 PTPRN2Q92932 1015 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 GABRG3Q99928 467 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 PRDM16Q9HAZ2 1276 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 PRSS16Q9NQE7 514 aa12.64□□□□□ -0.39
GABPB1-208ENST00000558970 LHX3Q9UBR4 397 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms