RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 KDSRQ06136 332 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 SLC20A2Q08357 652 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 GPS1Q13098 491 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 TDGQ13569 410 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 NAA30Q147X3 362 aaPredicted RBP18.4■□□□□ 0.54
CLPX-203ENST00000558958 TRIM31Q9BZY9 425 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 EPB41L5Q9HCM4 733 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 SEPT3Q9UH03 358 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 ATP8A1Q9Y2Q0 1164 aa18.4■□□□□ 0.54
CLPX-203ENST00000558958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.39■□□□□ 0.54
CLPX-203ENST00000558958 ESYT3A0FGR9 886 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 NEBLO76041 1014 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 HLA-DQB2P05538 268 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 RPL21P46778 160 aaKnown RBP18.39■□□□□ 0.54
CLPX-203ENST00000558958 ECT2LQ008S8 904 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 CYTH1Q15438 398 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 TERB1Q8NA31 727 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 CASKIN2Q8WXE0 1202 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 PSKH2Q96QS6 385 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 PNKPQ96T60 521 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 DPH5Q9H2P9 285 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 NT5MQ9NPB1 228 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 HS3ST2Q9Y278 367 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 SNX24Q9Y343 169 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 MYO10Q9HD67 2058 aa18.39■□□□□ 0.54
CLPX-203ENST00000558958 TICRRQ7Z2Z1 1910 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 PRRT4C9JH25 899 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 NARSO43776 548 aaKnown RBP18.39■□□□□ 0.53
CLPX-203ENST00000558958 TMCC1O94876 653 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 METTL18O95568 372 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 SRFP11831 508 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 SERPINH1P50454 418 aaKnown RBP18.39■□□□□ 0.53
CLPX-203ENST00000558958 PFKPQ01813 784 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 ZNF235Q14590 738 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 TRADDQ15628 312 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 PARP6Q2NL67 630 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 PREPLQ4J6C6 727 aaPredicted RBP18.39■□□□□ 0.53
CLPX-203ENST00000558958 ITPRIPL1Q6GPH6 555 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 BBS5Q8N3I7 341 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 PGBD5Q8N414 524 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 TAB3Q8N5C8 712 aaPredicted RBP18.39■□□□□ 0.53
CLPX-203ENST00000558958 GPR161Q8N6U8 529 aaKnown RBP18.39■□□□□ 0.53
CLPX-203ENST00000558958 LRRC45Q96CN5 670 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 SNF8Q96H20 258 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 RPL10LQ96L21 214 aaKnown RBP18.39■□□□□ 0.53
CLPX-203ENST00000558958 GBA3Q9H227 469 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 GLOD4Q9HC38 313 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 GDF3Q9NR23 364 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 SLC2A4RGQ9NR83 387 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 RAB6BQ9NRW1 208 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 ELOVL2Q9NXB9 296 aa18.39■□□□□ 0.53
CLPX-203ENST00000558958 KIAA1549LQ6ZVL6 1849 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 COL4A2P08572 1712 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 SPECC1L-ADORA2AF8WAN1 911 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 K7ERQ8 282 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 MUSKO15146 869 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 TIMM44O43615 452 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 KAT7O95251 611 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 ASLP04424 464 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 ATP5BP06576 529 aaKnown RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 DLDP09622 509 aaKnown RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 NFKB1P19838 968 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 CTHP32929 405 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 GRIA2P42262 883 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 STK19P49842 368 aaPredicted RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 GALK1P51570 392 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 EIF4HQ15056 248 aaKnown RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 METTL3Q86U44 580 aaKnown RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 RALGPS2Q86X27 583 aaPredicted RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 IFT20Q8IY31 132 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 TSEN2Q8NCE0 465 aaKnown RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 SORCS1Q8WY21 1168 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 RUBCNQ92622 972 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 CINPQ9BW66 212 aaPredicted RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 CIPCQ9C0C6 399 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 C8orf33Q9H7E9 229 aaPredicted RBP18.38■□□□□ 0.53
CLPX-203ENST00000558958 ETNK1Q9HBU6 452 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 HEBP1Q9NRV9 189 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 GRHL1Q9NZI5 618 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 RSPH14Q9UHP6 348 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 SLC25A13Q9UJS0 675 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 ERVW-1Q9UQF0 538 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 TTLL3Q9Y4R7 772 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 PIAS3Q9Y6X2 628 aa18.38■□□□□ 0.53
CLPX-203ENST00000558958 TBC1D3BA6NDS4 549 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 C19orf67A6NJJ6 358 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 DNALI1O14645 258 aaPredicted RBP18.37■□□□□ 0.53
CLPX-203ENST00000558958 SMAD6O43541 496 aaKnown RBP18.37■□□□□ 0.53
CLPX-203ENST00000558958 SEC31AO94979 1220 aaKnown RBP18.37■□□□□ 0.53
CLPX-203ENST00000558958 SRCP12931 536 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 ITIH2P19823 946 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 PSMB4P28070 264 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 FDFT1P37268 417 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 VASPP50552 380 aaPredicted RBP18.37■□□□□ 0.53
CLPX-203ENST00000558958 ELF2Q15723 593 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 FAXCQ5TGI0 409 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 ALG1LQ6GMV1 187 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 TXNDC11Q6PKC3 985 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 SFTPA1Q8IWL2 248 aa18.37■□□□□ 0.53
CLPX-203ENST00000558958 SUGP1Q8IWZ8 645 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms