RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 IL21Q9HBE4 155 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 GLOD4Q9HC38 313 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 ZNF334Q9HCZ1 680 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-207ENST00000558763 KCNK9Q9NPC2 374 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 UBP1Q9NZI7 540 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 DPP7Q9UHL4 492 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 GRID1Q9ULK0 1009 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 MTCH2Q9Y6C9 303 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 PRUNE2Q8WUY3 3088 aa13.19□□□□□ -0.3
SMAD3-207ENST00000558763 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 J3KR12 359 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 GLP2RO95838 553 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 MT-CYBP00156 380 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 C1RP00736 705 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 KRT4P19013 534 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ADRA1AP35348 466 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 CCT5P48643 541 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 TNK2Q07912 1038 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 IHHQ14623 411 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ACBD5Q5T8D3 534 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 DENND5AQ6IQ26 1287 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ELMSAN1Q6PJG2 1045 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 Q7L0L9 218 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 CKAP2Q8WWK9 683 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 TTC17Q96AE7 1141 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 CHMP6Q96FZ7 201 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 RPRD1AQ96P16 312 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 FCRL3Q96P31 734 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 APOL2Q9BQE5 337 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 APOL5Q9BWW9 433 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 LRRC40Q9H9A6 602 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 SLC17A6Q9P2U8 582 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ZCWPW2A0A1B0GU75 182 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ACSL4O60488 711 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 STC2O76061 302 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 INHBAP08476 426 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 RPA3P35244 121 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 KCNC3Q14003 757 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 TIGD7Q6NT04 549 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 TMC5Q6UXY8 1006 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 MARK2Q7KZI7 788 aaKnown RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 OR52K2Q8NGK3 314 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ZDHHC7Q9NXF8 308 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 LMCD1Q9NZU5 365 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 SMG5Q9UPR3 1016 aaKnown RBP13.18□□□□□ -0.3
SMAD3-207ENST00000558763 ASB3Q9Y575 518 aa13.18□□□□□ -0.3
SMAD3-207ENST00000558763 F11P03951 625 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 HNRNPA1P09651 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMAD3-207ENST00000558763 MYL4P12829 197 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 GABRR2P28476 465 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 HOXA9P31269 272 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 MAPKAPK2P49137 400 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 SLC18A2Q05940 514 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 MTA1Q13330 715 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 HNRNPDQ14103 355 aaKnown RBP13.17□□□□□ -0.3
SMAD3-207ENST00000558763 SLC1A5Q15758 541 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 CERCAMQ5T4B2 595 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 CES3Q6UWW8 571 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 EP400NLQ6ZTU2 488 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 TMC8Q8IU68 726 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 CTAGE3PQ8IX95 158 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 LRRC34Q8IZ02 419 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 TEX26Q8N6G2 289 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 SLC22A12Q96S37 553 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 SMC6Q96SB8 1091 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-207ENST00000558763 KLF6Q99612 283 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-207ENST00000558763 KLF16Q9BXK1 252 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-207ENST00000558763 GKN1Q9NS71 199 aa13.17□□□□□ -0.3
SMAD3-207ENST00000558763 RBM22Q9NW64 420 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMAD3-207ENST00000558763 UXTQ9UBK9 157 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-207ENST00000558763 IQANK1A0A1B0GTG1 560 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 NRG2O14511 850 aaPredicted RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 GREM1O60565 184 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 XYLBO75191 536 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 OLFM2O95897 454 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 GJA1P17302 382 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 FOXN2P32314 431 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 ACVRL1P37023 503 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 SGSHP51688 502 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 ZXDBP98169 803 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 SLC10A7Q0GE19 358 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 SERINC3Q13530 473 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 FRG1Q14331 258 aaKnown RBP13.16□□□□□ -0.3
SMAD3-207ENST00000558763 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 KDELC1Q6UW63 502 aa13.16□□□□□ -0.3
SMAD3-207ENST00000558763 RTL10Q7L3V2 364 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms