RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 LOXL4Q96JB6 756 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 HSPA12BQ96MM6 686 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 NCAPGQ9BPX3 1015 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 ANP32EQ9BTT0 268 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 TM6SF2Q9BZW4 377 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 RETREG1Q9H6L5 497 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 FSCN3Q9NQT6 498 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 RXFP3Q9NSD7 469 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 PPM1HQ9ULR3 514 aa14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 REXO2Q9Y3B8 237 aaKnown RBP14.11□□□□□ -0.15
TSPAN3-205ENST00000558745 CHD5Q8TDI0 1954 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 CEP192Q8TEP8 1941 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 DFFAO00273 331 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 MCF2LO15068 1137 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 GDF9O60383 454 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 NDUFA10O95299 355 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 IGLV3-19P01714 112 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 C7P10643 843 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 TNNT1P13805 278 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 FECHP22830 423 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 CDC25BP30305 580 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 OXTRP30559 389 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 CHRNA3P32297 505 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 NOP2P46087 812 aaKnown RBP14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 HCAR3P49019 387 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 ARSEP51690 589 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 ZBTB16Q05516 673 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 SLC20A2Q08357 652 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 SERINC3Q13530 473 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 KRT81Q14533 505 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 ELAVL3Q14576 367 aaKnown RBP14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 CYTH1Q15438 398 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 HADHQ16836 314 aaKnown RBP14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 PLA2G2CQ5R387 149 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 DCAF12L1Q5VU92 463 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 LYSMD4Q5XG99 296 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 CYP2U1Q7Z449 544 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 TMTC1Q8IUR5 882 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 TMEM139Q8IV31 216 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 CCDC170Q8IYT3 715 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 RGL4Q8IZJ4 473 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 ACRBPQ8NEB7 543 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 ARRDC3Q96B67 414 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 CSPG4P5Q96PW8 444 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 OMDQ99983 421 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 BTBD1Q9H0C5 482 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 GOLPH3Q9H4A6 298 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 FBRSQ9HAH7 460 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 SALL4Q9UJQ4 1053 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 SLCO1B1Q9Y6L6 691 aa14.1□□□□□ -0.15
TSPAN3-205ENST00000558745 PLXND1Q9Y4D7 1925 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 A0A0U1RQJ8 604 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 EIF3CLB5ME19 914 aaKnown RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 H3BRJ5 948 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 MTA2O94776 668 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 HTR7P34969 479 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 DRD3P35462 400 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 CYLC1P35663 651 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 ETFBP38117 255 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 ARL4AP40617 200 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 YBEYP58557 167 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 CSRP2Q16527 193 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 TTC31Q49AM3 519 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 CARD16Q5EG05 197 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 ATXN7L2Q5T6C5 722 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 AFMIDQ63HM1 303 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 RHOT2Q8IXI1 618 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 RYBPQ8N488 228 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 GRIN3AQ8TCU5 1115 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 LRRN4Q8WUT4 740 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 TEKT4Q8WW24 435 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 RFFLQ8WZ73 363 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 RAPGEF5Q92565 580 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 TSC1Q92574 1164 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 EIF3CQ99613 913 aaKnown RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 BAG1Q99933 345 aaPredicted RBP14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 INTUQ9ULD6 942 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 HPCAL4Q9UM19 191 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 NCKAP1Q9Y2A7 1128 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 WASF2Q9Y6W5 498 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 DUSP10Q9Y6W6 482 aa14.09□□□□□ -0.15
TSPAN3-205ENST00000558745 METTL12A8MUP2 240 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 KPNA3O00505 521 aaPredicted RBP14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 INSIG1O15503 277 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 TMCC1O94876 653 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 SEMA4FO95754 770 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 ZNF806P0C7X5 589 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 C5AR1P21730 350 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 COMTP21964 271 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 CLCN6P51797 869 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 CCNHP51946 323 aaPredicted RBP14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 NDST2P52849 883 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 IRX4P78413 519 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 CNTN1Q12860 1018 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 DPYSL3Q14195 570 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 SPA17Q15506 151 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 PARP15Q460N3 678 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 FAM182AQ5T1J6 154 aa14.08□□□□□ -0.16
TSPAN3-205ENST00000558745 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms