RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 METTL3Q86U44 580 aaKnown RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 CACUL1Q86Y37 369 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 PCDH20Q8N6Y1 951 aaKnown RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 PLD5Q8N7P1 536 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 ALG3Q92685 438 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 ISG20Q96AZ6 181 aaKnown RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 FAM129BQ96TA1 746 aa26.03■■□□□ 1.76
SMAD6-202ENST00000557916 RSPH9Q9H1X1 276 aaPredicted RBP26.03■■□□□ 1.76
SMAD6-202ENST00000557916 TMCC1O94876 653 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 DNA2P51530 1060 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 GBE1Q04446 702 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 TFDP2Q14188 446 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 KAZNQ674X7 775 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 ZNF776Q68DI1 518 aaPredicted RBP26.02■■□□□ 1.76
SMAD6-202ENST00000557916 ATPAF2Q8N5M1 289 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 OR2A12Q8NGT7 310 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 CCDC114Q96M63 670 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 FARP1Q9Y4F1 1045 aaPredicted RBP26.02■■□□□ 1.76
SMAD6-202ENST00000557916 R4GN57 208 aa26.02■■□□□ 1.76
SMAD6-202ENST00000557916 hCG_1818297A0A087WSY0 165 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 MAP3K6O95382 1288 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 RECQLP46063 649 aaPredicted RBP26.01■■□□□ 1.75
SMAD6-202ENST00000557916 COPS2P61201 443 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 RPS14P62263 151 aaKnown RBP26.01■■□□□ 1.75
SMAD6-202ENST00000557916 DYNLT1P63172 113 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 GALNT2Q10471 571 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 USP39Q53GS9 565 aaKnown RBP26.01■■□□□ 1.75
SMAD6-202ENST00000557916 ZC3H14Q6PJT7 736 aaKnown RBP26.01■■□□□ 1.75
SMAD6-202ENST00000557916 LRRC49Q8IUZ0 686 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 REXO1L1PQ8IX06 675 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 UBE2Q2Q8WVN8 375 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 OR8D1Q8WZ84 308 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 HES6Q96HZ4 224 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 HEY1Q9Y5J3 304 aa26.01■■□□□ 1.75
SMAD6-202ENST00000557916 MCF2LO15068 1137 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 DDX3YO15523 660 aaKnown RBP26■■□□□ 1.75
SMAD6-202ENST00000557916 MAFKO60675 156 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 ACADMP11310 421 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 SLC10A2Q12908 348 aaPredicted RBP26■■□□□ 1.75
SMAD6-202ENST00000557916 PPP2R5EQ16537 467 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 CARD16Q5EG05 197 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 MMAAQ8IVH4 418 aaKnown RBP26■■□□□ 1.75
SMAD6-202ENST00000557916 TRIM58Q8NG06 486 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 TM6SF2Q9BZW4 377 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 DTLQ9NZJ0 730 aa26■■□□□ 1.75
SMAD6-202ENST00000557916 NYNRINQ9P2P1 1898 aaKnown RBP26■■□□□ 1.75
SMAD6-202ENST00000557916 CST8O60676 142 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 LILRB5O75023 590 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 C7P10643 843 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 PYGMP11217 842 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 MX2P20592 715 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 CNR2P34972 360 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 CETN2P41208 172 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 GARSP41250 739 aaKnown RBP25.99■■□□□ 1.75
SMAD6-202ENST00000557916 CYTH1Q15438 398 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 DPY19L3Q6ZPD9 716 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 DSG4Q86SJ6 1040 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 RLN3Q8WXF3 142 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 ZNF599Q96NL3 588 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 FAM86C1Q9NVL1 165 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 TRMT1Q9NXH9 659 aaKnown RBP25.99■■□□□ 1.75
SMAD6-202ENST00000557916 INVSQ9Y283 1065 aa25.99■■□□□ 1.75
SMAD6-202ENST00000557916 ALOX15BO15296 676 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 HRO43593 1189 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 ZNF217O75362 1048 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 RPP40O75818 363 aaKnown RBP25.98■■□□□ 1.75
SMAD6-202ENST00000557916 DNTTP04053 509 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 RHOAP61586 193 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 SNRPD1P62314 119 aaKnown RBP25.98■■□□□ 1.75
SMAD6-202ENST00000557916 ZBTB16Q05516 673 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 ADCY2Q08462 1091 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 SRSF5Q13243 272 aaKnown RBP25.98■■□□□ 1.75
SMAD6-202ENST00000557916 BYSLQ13895 437 aaKnown RBP25.98■■□□□ 1.75
SMAD6-202ENST00000557916 RFTN1Q14699 578 aaPredicted RBP25.98■■□□□ 1.75
SMAD6-202ENST00000557916 NPNTQ6UXI9 565 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 PLPP6Q8IY26 295 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 CHST14Q8NCH0 376 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 GAB3Q8WWW8 586 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 HEMGNQ9BXL5 484 aa25.98■■□□□ 1.75
SMAD6-202ENST00000557916 GSRP00390 522 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 IL1BP01584 269 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 CHRNA3P32297 505 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 P2RY2P41231 377 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 CST6Q15828 149 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 MAP7D1Q3KQU3 841 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 TMCO4Q5TGY1 634 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 MEI1Q5TIA1 1274 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 RYBPQ8N488 228 aaPredicted RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 OR2AP1Q8NGE2 309 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 ITM2CQ9NQX7 267 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 HECAQ9UBI9 543 aaPredicted RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 PPM1HQ9ULR3 514 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 PYCARDQ9ULZ3 195 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 CYP8B1Q9UNU6 501 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 ARIH1Q9Y4X5 557 aaPredicted RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 TGM2P21980 687 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 SLC8A1P32418 973 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 PTPN7P35236 360 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 PSMD8P48556 350 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 TPMTP51580 245 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms