RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 HNRNPDQ14103 355 aaKnown RBP13.95□□□□□ -0.18
SHMT2-234ENST00000557703 PDK1Q15118 436 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 ANO7Q6IWH7 933 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 KIAA1211LQ6NV74 962 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 C22orf39Q6P5X5 142 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 HMGB4Q8WW32 186 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 GAB3Q8WWW8 586 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 ITM2CQ9NQX7 267 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 C2orf42Q9NWW7 574 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-234ENST00000557703 IPO11Q9UI26 975 aaKnown RBP13.95□□□□□ -0.18
SHMT2-234ENST00000557703 TFR2Q9UP52 801 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 MFHAS1Q9Y4C4 1052 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 MUC22E2RYF6 1773 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 C1QTNF3-AMACRE9PGA6 284 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 H0Y858 1186 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 SIN3BO75182 1162 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 POP4O95707 220 aaKnown RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 MT-CO1P00395 513 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 CD48P09326 243 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 COL9A1P20849 921 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 C5AR1P21730 350 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 TGM2P21980 687 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 P2RY2P41231 377 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 WASP42768 502 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 STK19P49842 368 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 GALNT2Q10471 571 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 CARD16Q5EG05 197 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 NCBP2-AS2Q69YL0 99 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 PGBD3Q8N328 593 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 ATPAF2Q8N5M1 289 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 PQLC3Q8N755 202 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 OR2AP1Q8NGE2 309 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 HCAR2Q8TDS4 363 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 ATOH1Q92858 354 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 HDAC11Q96DB2 347 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 HES6Q96HZ4 224 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 PPP1R16AQ96I34 528 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 ZC3H10Q96K80 434 aaKnown RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 PSKH2Q96QS6 385 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 FAM129BQ96TA1 746 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 OSBPL1AQ9BXW6 950 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 CPEB1Q9BZB8 566 aaKnown RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 MKRN2Q9H000 416 aaKnown RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 SP110Q9HB58 689 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 USP36Q9P275 1121 aaKnown RBP13.94□□□□□ -0.18
SHMT2-234ENST00000557703 SEPT3Q9UH03 358 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 PPM1HQ9ULR3 514 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 FZD4Q9ULV1 537 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 NCKAP1Q9Y2A7 1128 aa13.94□□□□□ -0.18
SHMT2-234ENST00000557703 SPAG17Q6Q759 2223 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 DFFAO00273 331 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-234ENST00000557703 SLC7A4O43246 635 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 MTSS1O43312 755 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 MAFKO60675 156 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 RPP40O75818 363 aaKnown RBP13.93□□□□□ -0.18
SHMT2-234ENST00000557703 TJP3O95049 919 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 CD160O95971 181 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 HLA-EP13747 358 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 NDUFV2P19404 249 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 FNTBP49356 437 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 MFSD7Q6UXD7 560 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 SPOCD1Q6ZMY3 1216 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 BBS12Q6ZW61 710 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 ZSCAN30Q86W11 494 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 NPWQ8N729 165 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 PLD5Q8N7P1 536 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 OR2A12Q8NGT7 310 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-234ENST00000557703 CELF6Q96J87 481 aaKnown RBP13.93□□□□□ -0.18
SHMT2-234ENST00000557703 GDAP1L1Q96MZ0 367 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 FERMT1Q9BQL6 677 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 HEPHQ9BQS7 1158 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 SGK2Q9HBY8 427 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 ZDHHC4Q9NPG8 344 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 LZTFL1Q9NQ48 299 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 ETNK2Q9NVF9 386 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 PIEZO1Q92508 2521 aa13.93□□□□□ -0.18
SHMT2-234ENST00000557703 PLXND1Q9Y4D7 1925 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 hCG_1818297A0A087WSY0 165 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 A0A1W2PQ67 120 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 ANTXRLA6NF34 631 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 APOC4-APOC2K7ER74 178 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 MATN3O15232 486 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 ZNF821O75541 412 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-234ENST00000557703 RHOBTB1O94844 696 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 TMCC1O94876 653 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 IGSF6O95976 241 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 APOC2P02655 101 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 GLDCP23378 1020 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 CHRNA3P32297 505 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 SUOXP51687 545 aa13.92□□□□□ -0.18
SHMT2-234ENST00000557703 RPS14P62263 151 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms