RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 PATL1Q86TB9 770 aaKnown RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SGCDQ92629 289 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TUBB6Q9BUF5 446 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 C1QTNF7Q9BXJ2 289 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 RANBP17Q9H2T7 1088 aaKnown RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PLEKHA4Q9H4M7 779 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SLITRK6Q9H5Y7 841 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 EPHX3Q9H6B9 360 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ACTR5Q9H9F9 607 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SLCO3A1Q9UIG8 710 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 COL3A1P02461 1466 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 LRRC3CA6NJW4 275 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF814B7Z6K7 855 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PPP6CO00743 305 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 MDM4O15151 490 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 GCATO75600 419 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 RXRAP19793 462 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 CHATP28329 748 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ABCD1P33897 745 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TTKP33981 857 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SHC2P98077 582 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 G3BP1Q13283 466 aaKnown RBP eCLIP1.85□□□□□ -2.113e-6■■□□□ 12.1
HIF1A-212ENST00000557538 HSP90AB3PQ58FF7 597 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 DCAF6Q58WW2 860 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PIK3CD-AS1Q5SR53 167 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PRAMEF17Q5VTA0 474 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 FAAH2Q6GMR7 532 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 NAPEPLDQ6IQ20 393 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 C4orf50Q6ZRC1 276 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 IGFN1Q86VF2 1251 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 KLBQ86Z14 1044 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 MIGA1Q8NAN2 632 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 NTN5Q8WTR8 489 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 FAR1Q8WVX9 515 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 KAT2BQ92831 832 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 RNF125Q96EQ8 232 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SAAL1Q96ER3 474 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 PGAM5Q96HS1 289 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 RSRC1Q96IZ7 334 aaKnown RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ABI3Q9P2A4 366 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 IFT80Q9P2H3 777 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 KLHL13Q9P2N7 655 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 ORC3Q9UBD5 711 aaPredicted RBP1.85□□□□□ -2.11
HIF1A-212ENST00000557538 SEL1LQ9UBV2 794 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 HSF4Q9ULV5 492 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 TNFSF13BQ9Y275 285 aa1.85□□□□□ -2.11
HIF1A-212ENST00000557538 CGB1A6NKQ9 187 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 F8W810 466 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 TP73O15350 636 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF500O60304 480 aaPredicted RBP1.84□□□□□ -2.11
HIF1A-212ENST00000557538 URODP06132 367 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 MMP3P08254 477 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 CYP2D6P10635 497 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 ATP5F1P24539 256 aaPredicted RBP1.84□□□□□ -2.11
HIF1A-212ENST00000557538 CDH15P55291 814 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 EIF3BP55884 814 aaKnown RBP1.84□□□□□ -2.11
HIF1A-212ENST00000557538 ECT2LQ008S8 904 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 OLIG2Q13516 323 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 LAMB3Q13751 1172 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 C5orf22Q49AR2 442 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 ZKSCAN2Q63HK3 967 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 FAM109BQ6ICB4 259 aaPredicted RBP1.84□□□□□ -2.11
HIF1A-212ENST00000557538 HMBOX1Q6NT76 420 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 AAGABQ6PD74 315 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 SLC30A9Q6PML9 568 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 KIAA1324Q6UXG2 1013 aaKnown RBP1.84□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF66Q6ZN08 573 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 GET4Q7L5D6 327 aaPredicted RBP1.84□□□□□ -2.11
HIF1A-212ENST00000557538 RBFAQ8N0V3 343 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 SLC44A5Q8NCS7 719 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 ITFG2Q969R8 447 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 VCPIP1Q96JH7 1222 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 LMAN2LQ9H0V9 348 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 ACAD9Q9H845 621 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 CPNE5Q9HCH3 593 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 WDR17Q8IZU2 1322 aa1.84□□□□□ -2.11
HIF1A-212ENST00000557538 K7ENM7 598 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 ANP32CO43423 234 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 PDE8BO95263 885 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 CCNDBP1O95273 360 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 ADAP00813 363 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 TNFAIP3P21580 790 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 YWHAQP27348 245 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 ABCD3P28288 659 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 CD38P28907 300 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 KRT9P35527 623 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 VPS41P49754 854 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 GEMIN4P57678 1058 aaKnown RBP1.84□□□□□ -2.12
HIF1A-212ENST00000557538 MAP2K1Q02750 393 aaPredicted RBP1.84□□□□□ -2.12
HIF1A-212ENST00000557538 PRKG2Q13237 762 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 CDC37Q16543 378 aaPredicted RBP1.84□□□□□ -2.12
HIF1A-212ENST00000557538 P3H1Q32P28 736 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 MIDNQ504T8 468 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 RUNDC3AQ59EK9 446 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 AKNAD1Q5T1N1 836 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 C10orf25Q5T742 122 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 LRIG3Q6UXM1 1119 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 TRILQ7L0X0 811 aa1.84□□□□□ -2.12
HIF1A-212ENST00000557538 C1QL2Q7Z5L3 287 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms