RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ZNF419Q96HQ0 510 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-214ENST00000557490 KCTD15Q96SI1 283 aaPredicted RBP16.21■□□□□ 0.19
TUBB3-214ENST00000557490 OMDQ99983 421 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 PACSIN1Q9BY11 444 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 BTBD1Q9H0C5 482 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 SGK2Q9HBY8 427 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 RXFP3Q9NSD7 469 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 SPTLC3Q9NUV7 552 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 FBXL12Q9NXK8 326 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 LCMT1Q9UIC8 334 aa16.21■□□□□ 0.19
TUBB3-214ENST00000557490 NAV2Q8IVL1 2488 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 CXorf51AA0A1B0GTR3 108 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 MEI4A8MW99 385 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 C1QTNF3-AMACRE9PGA6 284 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 K7ERQ8 282 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 KHNYNO15037 678 aaKnown RBP16.2■□□□□ 0.18
TUBB3-214ENST00000557490 ALOX15BO15296 676 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 SMAD6O43541 496 aaKnown RBP16.2■□□□□ 0.18
TUBB3-214ENST00000557490 TMEM253P0C7T8 217 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 C5AR1P21730 350 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 ITPKAP23677 461 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 HOXD12P35452 270 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 SSR1P43307 286 aaKnown RBP16.2■□□□□ 0.18
TUBB3-214ENST00000557490 SERPINH1P50454 418 aaKnown RBP16.2■□□□□ 0.18
TUBB3-214ENST00000557490 YBEYP58557 167 aaPredicted RBP16.2■□□□□ 0.18
TUBB3-214ENST00000557490 ARF5P84085 180 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 SF3A2Q15428 464 aaKnown RBP16.2■□□□□ 0.18
TUBB3-214ENST00000557490 WDR45BQ5MNZ6 344 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 DAB2IPQ5VWQ8 1189 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 C22orf39Q6P5X5 142 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 SLC41A1Q8IVJ1 513 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 RGL4Q8IZJ4 473 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 TC2NQ8N9U0 490 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 CEP44Q9C0F1 390 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 PCED1AQ9H1Q7 454 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 SMOC1Q9H4F8 434 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 ZWILCHQ9H900 591 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 PILRBQ9UKJ0 227 aa16.2■□□□□ 0.18
TUBB3-214ENST00000557490 ABCA7Q8IZY2 2146 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 A0A1W2PP55 124 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 TMEM8BA6NDV4 472 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 ZSCAN5CA6NGD5 496 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-214ENST00000557490 RASA4BC9J798 803 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 H3BRJ5 948 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 MCF2LO15068 1137 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 RASA4O43374 803 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 KDELR3O43731 214 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 RNASEH2AO75792 299 aaKnown RBP16.19■□□□□ 0.18
TUBB3-214ENST00000557490 SEMA4FO95754 770 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 GOT1P17174 413 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 IL1R2P27930 398 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 DNA2P51530 1060 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 HADHQ16836 314 aaKnown RBP16.19■□□□□ 0.18
TUBB3-214ENST00000557490 SMTNL2Q2TAL5 461 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 PARP15Q460N3 678 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 KCNT1Q5JUK3 1230 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 RFX8Q6ZV50 586 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 CYP4V2Q6ZWL3 525 aaPredicted RBP16.19■□□□□ 0.18
TUBB3-214ENST00000557490 RABEPKQ7Z6M1 372 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 UMODL1-AS1Q8N2C9 162 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 HDDC3Q8N4P3 179 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 PCDH20Q8N6Y1 951 aaKnown RBP16.19■□□□□ 0.18
TUBB3-214ENST00000557490 CEP76Q8TAP6 659 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 TEKT4Q8WW24 435 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 HSPH1Q92598 858 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 PLXND1Q9Y4D7 1925 aa16.19■□□□□ 0.18
TUBB3-214ENST00000557490 ATXN2Q99700 1313 aaKnown RBP16.19■□□□□ 0.18
TUBB3-214ENST00000557490 BPTFQ12830 3046 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 METTL12A8MUP2 240 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 BUB1O43683 1085 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 ZIC2O95409 532 aaPredicted RBP16.18■□□□□ 0.18
TUBB3-214ENST00000557490 GNSP15586 552 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 ACSL1P33121 698 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 ARL4AP40617 200 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 HCAR3P49019 387 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 NDST2P52849 883 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 DPYSL2Q16555 572 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 DUOXA1Q1HG43 343 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 STPG1Q5TH74 334 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 DCAF12L1Q5VU92 463 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 TCEAL6Q6IPX3 200 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 PSAPL1Q6NUJ1 521 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 OR2A12Q8NGT7 310 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 PIP4K2CQ8TBX8 421 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 TCEAL3Q969E4 200 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 HMCESQ96FZ2 354 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 NEUROG2Q9H2A3 272 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 TNKS2Q9H2K2 1166 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 NOL6Q9H6R4 1146 aaKnown RBP16.18■□□□□ 0.18
TUBB3-214ENST00000557490 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.18■□□□□ 0.18
TUBB3-214ENST00000557490 TMEM74BQ9NUR3 256 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 SUSD2Q9UGT4 822 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 EVLQ9UI08 416 aaPredicted RBP16.18■□□□□ 0.18
TUBB3-214ENST00000557490 PPM1HQ9ULR3 514 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 FZD4Q9ULV1 537 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 WASF3Q9UPY6 502 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 FCF1Q9Y324 198 aaKnown RBP16.18■□□□□ 0.18
TUBB3-214ENST00000557490 THADAQ6YHU6 1953 aa16.18■□□□□ 0.18
TUBB3-214ENST00000557490 DOCK4Q8N1I0 1966 aa16.17■□□□□ 0.18
TUBB3-214ENST00000557490 TAF4O00268 1085 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms