RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ARL14EPQ8N8R7 260 aaPredicted RBP5.01□□□□□ -1.61
PRPF39-212ENST00000557477 SETD9Q8NE22 299 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 TDRD7Q8NHU6 1098 aaKnown RBP5.01□□□□□ -1.61
PRPF39-212ENST00000557477 KCNG4Q8TDN1 519 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 RAB40AQ8WXH6 277 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 CNOT9Q92600 299 aaKnown RBP5.01□□□□□ -1.61
PRPF39-212ENST00000557477 KAT2AQ92830 837 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 SH3KBP1Q96B97 665 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 C7orf26Q96N11 449 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 CADM1Q9BY67 442 aaKnown RBP5.01□□□□□ -1.61
PRPF39-212ENST00000557477 SLC32A1Q9H598 525 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 BLOC1S4Q9NUP1 217 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 ZNHIT2Q9UHR6 403 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 MROH2AA6NES4 1674 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF142P52746 1687 aaPredicted RBP5.01□□□□□ -1.61
PRPF39-212ENST00000557477 ATP7AQ04656 1500 aa5.01□□□□□ -1.61
PRPF39-212ENST00000557477 PLA2R1Q13018 1463 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 WDR33Q9C0J8 1336 aaKnown RBP5□□□□□ -1.61
PRPF39-212ENST00000557477 PTPRKQ15262 1439 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 CYP2D7A0A087X1C5 515 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 HBP1O60381 514 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 PROP1O75360 226 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 FCGR2AP12318 317 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 KRT32Q14532 448 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF268Q14587 947 aaPredicted RBP5□□□□□ -1.61
PRPF39-212ENST00000557477 FBXO42Q6P3S6 717 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF66Q6ZN08 573 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF788Q6ZQV5 615 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 NEK8Q86SG6 692 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 ZCCHC10Q8TBK6 192 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 KAT2BQ92831 832 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 SORCS2Q96PQ0 1159 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 MRIQ9BWK5 157 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 MOV10Q9HCE1 1003 aaKnown RBP5□□□□□ -1.61
PRPF39-212ENST00000557477 PDGFCQ9NRA1 345 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 ORC3Q9UBD5 711 aaPredicted RBP5□□□□□ -1.61
PRPF39-212ENST00000557477 SLC8A2Q9UPR5 921 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 OSGIN2Q9Y236 505 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 TNFSF13BQ9Y275 285 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 CPS1P31327 1500 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 CDC42BPBQ9Y5S2 1711 aa5□□□□□ -1.61
PRPF39-212ENST00000557477 SAMD9LQ8IVG5 1584 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 ITIH6Q6UXX5 1313 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 KIDINS220Q9ULH0 1771 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 SETD1BQ9UPS6 1966 aaKnown RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 A0A087X0M5 115 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 GOLGA6L10A0A0M3HER8 536 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 A0A1B0GX30 115 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 C2CD4BA6NLJ0 364 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 TEX22C9J3V5 150 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 TSPAN4O14817 238 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 MSI1O43347 362 aaKnown RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 STRNO43815 780 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 NFATC1O95644 943 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 CHRM4P08173 479 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 EPHA8P29322 1005 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 HARS2P49590 506 aaKnown RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 DCAF7P61962 342 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 PTP4A2Q12974 167 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 GALNT3Q14435 633 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 FAM171A1Q5VUB5 890 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 AADACL2Q6P093 401 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 PCGF5Q86SE9 256 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 PLD5Q8N7P1 536 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 FAM47BQ8NA70 645 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 ANKRD52Q8NB46 1076 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 SEMA6DQ8NFY4 1073 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 NFKBIDQ8NI38 313 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 CENPIQ92674 756 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 RIOX1Q9H6W3 641 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 VEZTQ9HBM0 779 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 ZNF304Q9HCX3 659 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 NLKQ9UBE8 527 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 CFDP1Q9UEE9 299 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 FBXO9Q9UK97 447 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 ICKQ9UPZ9 632 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 POLR1AO95602 1720 aaPredicted RBP4.99□□□□□ -1.61
PRPF39-212ENST00000557477 CCNB3Q8WWL7 1395 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 A2MP01023 1474 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 ARHGAP35Q9NRY4 1499 aa4.99□□□□□ -1.61
PRPF39-212ENST00000557477 FAM135AQ9P2D6 1515 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 TARSL2A2RTX5 802 aaKnown RBP4.98□□□□□ -1.61
PRPF39-212ENST00000557477 PGPEP1LA6NFU8 196 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 WIPF3A6NGB9 483 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 GAGE10A6NGK3 116 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 PRSS47A8MTI9 375 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 TNFSF14O43557 240 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 CEP104O60308 925 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 TMEM63AO94886 807 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 CBX6O95503 412 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 DDAH2O95865 285 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 ADAP00813 363 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 WNT1P04628 370 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 TFEBP19484 476 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 BDNFP23560 247 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 RGS2P41220 211 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 STAT1P42224 750 aa4.98□□□□□ -1.61
PRPF39-212ENST00000557477 CASP2P42575 452 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms