RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 ARHGEF2Q92974 986 aaKnown RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 MRFAP1L1Q96HT8 127 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 ACE2Q9BYF1 805 aaPredicted RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 NEUROG2Q9H2A3 272 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 TMEM74BQ9NUR3 256 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 CTTNBP2NLQ9P2B4 639 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 ARHGAP20Q9P2F6 1191 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 UVRAGQ9P2Y5 699 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 IL36AQ9UHA7 158 aa14.1□□□□□ -0.15
VPS33B-206ENST00000557358 EIF2B4Q9UI10 523 aaKnown RBP14.1□□□□□ -0.15
VPS33B-206ENST00000557358 TNRC6BQ9UPQ9 1833 aaKnown RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3DA0A087WVF3 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3IA0A087WXS9 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3EA0A087X179 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3KA0A087X1G2 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3FA6NER0 549 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 C4orf47A7E2U8 309 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 WASH4PA8MWX3 477 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3LB9A6J9 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 KDELR3O43731 214 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 OPHN1O60890 802 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 MT-CO1P00395 513 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 CYP1A2P05177 515 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3HP0C7X1 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 VAV1P15498 845 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 ENGP17813 658 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 KCNA4P22459 653 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 CD27P26842 260 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 MAOBP27338 520 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 NUDT1P36639 197 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 MAPK8P45983 427 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 AFF3P51826 1226 aaKnown RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 GALCP54803 685 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 UAP1L1Q3KQV9 507 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 CARD16Q5EG05 197 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3GQ6DHY5 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3CQ6IPX1 549 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 NCEH1Q6PIU2 408 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 PRPF39Q86UA1 669 aaKnown RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 DNAAF5Q86Y56 855 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 TBC1D3Q8IZP1 549 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 ZCCHC9Q8N567 271 aaKnown RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 LZTR1Q8N653 840 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 ZNF564Q8TBZ8 553 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 ISG20Q96AZ6 181 aaKnown RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 HEPHQ9BQS7 1158 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 SNRNP25Q9BV90 132 aaKnown RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 C6orf106Q9H6K1 298 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 LUC7LQ9NQ29 371 aaKnown RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 ZNF212Q9UDV6 495 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 PPM1HQ9ULR3 514 aa14.09□□□□□ -0.15
VPS33B-206ENST00000557358 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.09□□□□□ -0.15
VPS33B-206ENST00000557358 NYNRINQ9P2P1 1898 aaKnown RBP14.08□□□□□ -0.16
VPS33B-206ENST00000557358 RASA4BC9J798 803 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 ARHGAP33O14559 1287 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 RASA4O43374 803 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 MFAP3LO75121 409 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 LRCH4O75427 683 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 CER1O95813 267 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 GLDCP23378 1020 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 ACVRL1P37023 503 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 CCR5P51681 352 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 NDST2P52849 883 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 ADKP55263 362 aaKnown RBP14.08□□□□□ -0.16
VPS33B-206ENST00000557358 C21orf59P57076 290 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 KRT81Q14533 505 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 INO80DQ53TQ3 878 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-206ENST00000557358 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 RFX8Q6ZV50 586 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 UMODL1-AS1Q8N2C9 162 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 NIPA2Q8N8Q9 360 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 OR2A12Q8NGT7 310 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 LRIG1Q96JA1 1093 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 TNKS2Q9H2K2 1166 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 SLC32A1Q9H598 525 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 CAPN10Q9HC96 672 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 GPATCH2LQ9NWQ4 482 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 CACNA1EQ15878 2313 aa14.08□□□□□ -0.16
VPS33B-206ENST00000557358 DCDC2BA2VCK2 349 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 K7ERQ8 282 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 SMAD6O43541 496 aaKnown RBP14.07□□□□□ -0.16
VPS33B-206ENST00000557358 ZMPSTE24O75844 475 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 POP4O95707 220 aaKnown RBP14.07□□□□□ -0.16
VPS33B-206ENST00000557358 IGSF6O95976 241 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 GSRP00390 522 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 CDC25BP30305 580 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 SERPINB6P35237 376 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 HCAR3P49019 387 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 ADPRHP54922 357 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 ARF5P84085 180 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 SEMA3BQ13214 749 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 ODF2Q5BJF6 829 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 DPY19L3Q6ZPD9 716 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 MAP7D3Q8IWC1 876 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 AADATQ8N5Z0 425 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 GRIN3AQ8TCU5 1115 aa14.07□□□□□ -0.16
VPS33B-206ENST00000557358 TEKT4Q8WW24 435 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms