RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 VAV1P15498 845 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 YBEYP58557 167 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-207ENST00000556831 ZNF252P-AS1Q0IIN9 211 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 DUOXA1Q1HG43 343 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 BOLA3Q53S33 107 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 TRIM61Q5EBN2 209 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 PLA2G2CQ5R387 149 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 ZFYVE27Q5T4F4 411 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 NLRP14Q86W24 1093 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 RYBPQ8N488 228 aaPredicted RBP14.39□□□□□ -0.11
SLIRP-207ENST00000556831 HDDC3Q8N4P3 179 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 PCDH20Q8N6Y1 951 aaKnown RBP14.39□□□□□ -0.11
SLIRP-207ENST00000556831 HSPH1Q92598 858 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 ARHGEF2Q92974 986 aaKnown RBP14.39□□□□□ -0.11
SLIRP-207ENST00000556831 MRFAP1L1Q96HT8 127 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 EDEM2Q9BV94 578 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 RBSNQ9H1K0 784 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 FSCN3Q9NQT6 498 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 TMEM74BQ9NUR3 256 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 FZD4Q9ULV1 537 aa14.39□□□□□ -0.11
SLIRP-207ENST00000556831 CXorf51AA0A1B0GTR3 108 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 MCF2LO15068 1137 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 BUB1O43683 1085 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 IPO7O95373 1038 aaKnown RBP14.38□□□□□ -0.11
SLIRP-207ENST00000556831 GLDCP23378 1020 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 ACVRL1P37023 503 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 ZNF75DP51815 510 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 KRT81Q14533 505 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 SMTNL2Q2TAL5 461 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 DCAF12L1Q5VU92 463 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 RFX8Q6ZV50 586 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 SLC41A1Q8IVJ1 513 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 NIPA2Q8N8Q9 360 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 FRS2Q8WU20 508 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
SLIRP-207ENST00000556831 ARHGEF26Q96DR7 871 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 ZNF419Q96HQ0 510 aaPredicted RBP14.38□□□□□ -0.11
SLIRP-207ENST00000556831 RTKNQ9BST9 563 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 TNKS2Q9H2K2 1166 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.38□□□□□ -0.11
SLIRP-207ENST00000556831 SPTLC3Q9NUV7 552 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 ZNF212Q9UDV6 495 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 EVLQ9UI08 416 aaPredicted RBP14.38□□□□□ -0.11
SLIRP-207ENST00000556831 PILRBQ9UKJ0 227 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 NEU3Q9UQ49 428 aa14.38□□□□□ -0.11
SLIRP-207ENST00000556831 ADAMTS9Q9P2N4 1935 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 ARHGAP42A6NI28 874 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 WASH4PA8MWX3 477 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 RASA4BC9J798 803 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 K7ERQ8 282 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 KPNA3O00505 521 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-207ENST00000556831 RASA4O43374 803 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 FSBPO95073 299 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 MT-CO1P00395 513 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 SYPP08247 313 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 TMEM253P0C7T8 217 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 GOT1P17174 413 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 ACSL1P33121 698 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 GJC1P36383 396 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 NDST2P52849 883 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 ARF5P84085 180 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 SEMA3BQ13214 749 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 RHOT2Q8IXI1 618 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 OR14C36Q8NHC7 312 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 PIP4K2CQ8TBX8 421 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 GRIN3AQ8TCU5 1115 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 CASKIN2Q8WXE0 1202 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 BTBD6Q96KE9 485 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 PEBP4Q96S96 227 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 KCTD15Q96SI1 283 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-207ENST00000556831 FAM129BQ96TA1 746 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 CHP1Q99653 195 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 ACE2Q9BYF1 805 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-207ENST00000556831 NDFIP2Q9NV92 336 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 IL36AQ9UHA7 158 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 TPX2Q9ULW0 747 aaKnown RBP14.37□□□□□ -0.11
SLIRP-207ENST00000556831 FCF1Q9Y324 198 aaKnown RBP14.37□□□□□ -0.11
SLIRP-207ENST00000556831 SLCO1B1Q9Y6L6 691 aa14.37□□□□□ -0.11
SLIRP-207ENST00000556831 TMEM110-MUSTN1A8MSY1 372 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 METTL12A8MUP2 240 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 SLC7A4O43246 635 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 SMAD6O43541 496 aaKnown RBP14.36□□□□□ -0.11
SLIRP-207ENST00000556831 KDELR3O43731 214 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 CHRNA3P32297 505 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 SERPINB6P35237 376 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 CYLC1P35663 651 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-207ENST00000556831 SNRPD1P62314 119 aaKnown RBP14.36□□□□□ -0.11
SLIRP-207ENST00000556831 RAD51Q06609 339 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 TBX2Q13207 712 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-207ENST00000556831 SPA17Q15506 151 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 CA9Q16790 459 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 POM121L1PQ3SYA9 428 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 CARD16Q5EG05 197 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 DAB2IPQ5VWQ8 1189 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-207ENST00000556831 UMODL1-AS1Q8N2C9 162 aa14.36□□□□□ -0.11
SLIRP-207ENST00000556831 ZCCHC9Q8N567 271 aaKnown RBP14.36□□□□□ -0.11
SLIRP-207ENST00000556831 OR2T34Q8NGX1 318 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms