RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 GSTM5P46439 218 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 RAE1P78406 368 aaKnown RBP5.71□□□□□ -1.5
HIF1A-209ENST00000556827 CFHR3Q02985 330 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 ICA1Q05084 483 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 CCDC15Q0P6D6 951 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 TCP10Q12799 353 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 SEMA3BQ13214 749 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 MFSD13AQ14CX5 517 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 FAM187BQ17R55 369 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 ZACNQ401N2 412 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 CCDC144NLQ6NUI1 221 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 MIS18BP1Q6P0N0 1132 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 MSANTD2Q6P1R3 559 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 TMEM65Q6PI78 240 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 C17orf99Q6UX52 265 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 GALNT16Q8N428 558 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 FAM71BQ8TC56 605 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 CCDC17Q96LX7 622 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 HS6ST2Q96MM7 605 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 ARHGAP39Q9C0H5 1083 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 BICC1Q9H694 974 aaKnown RBP5.71□□□□□ -1.5
HIF1A-209ENST00000556827 PDGFCQ9NRA1 345 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 HELLSQ9NRZ9 838 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 LRFN1Q9P244 771 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 LRRFIP2Q9Y608 721 aaKnown RBP5.71□□□□□ -1.5
HIF1A-209ENST00000556827 PTPRCP08575 1304 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 KIF16BQ96L93 1317 aa5.71□□□□□ -1.5
HIF1A-209ENST00000556827 POC1B-GALNT4F8VUJ3 575 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 CLIC1O00299 241 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 SKAP2O75563 359 aaPredicted RBP5.7□□□□□ -1.5
HIF1A-209ENST00000556827 GLP2RO95838 553 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 IGKV2-30P06310 120 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 ITGA5P08648 1049 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 PEPDP12955 493 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 CCL5P13501 91 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 DGKQP52824 942 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 ALDH18A1P54886 795 aaKnown RBP5.7□□□□□ -1.5
HIF1A-209ENST00000556827 PTK2BQ14289 1009 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 FAM83BQ5T0W9 1011 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 APOBEC3HQ6NTF7 200 aaKnown RBP5.7□□□□□ -1.5
HIF1A-209ENST00000556827 TLDC1Q6P9B6 456 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 DCDC5Q6ZRR9 648 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 CLASRPQ8N2M8 674 aaKnown RBP5.7□□□□□ -1.5
HIF1A-209ENST00000556827 GALNT4Q8N4A0 578 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 ENAHQ8N8S7 591 aaPredicted RBP5.7□□□□□ -1.5
HIF1A-209ENST00000556827 EIF3CQ99613 913 aaKnown RBP5.7□□□□□ -1.5
HIF1A-209ENST00000556827 PRSS22Q9GZN4 317 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 FZD4Q9ULV1 537 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 CA14Q9ULX7 337 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 ZHX2Q9Y6X8 837 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 UTYO14607 1347 aa5.7□□□□□ -1.5
HIF1A-209ENST00000556827 RPAP1Q9BWH6 1393 aaPredicted RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 CCDC187A0A096LP49 1063 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 KRTAP29-1A8MX34 341 aaPredicted RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 PROB1E7EW31 1015 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 M0QYT0 321 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 EYA2O00167 538 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 FCHO1O14526 889 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 TNPO2O14787 897 aaKnown RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 CTIFO43310 598 aaKnown RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 CER1O95813 267 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 CSTBP04080 98 aaKnown RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 PLCD1P51178 756 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 RABL6Q3YEC7 729 aaPredicted RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 CCDC38Q502W7 563 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 LRRC24Q50LG9 513 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 RINT1Q6NUQ1 792 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 CDC42EP5Q6NZY7 148 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 DZIP1Q86YF9 867 aaKnown RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 SCYL3Q8IZE3 742 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 FAM9BQ8IZU0 186 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 ADAMTS18Q8TE60 1221 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 U2AF1L4Q8WU68 220 aaKnown RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 SLC22A17Q8WUG5 538 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 ZBTB9Q96C00 473 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 NUDT22Q9BRQ3 303 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 CINPQ9BW66 212 aaPredicted RBP5.69□□□□□ -1.5
HIF1A-209ENST00000556827 SLC45A1Q9Y2W3 748 aa5.69□□□□□ -1.5
HIF1A-209ENST00000556827 ACKR2O00590 384 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 ENTPD3O75355 529 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 MOSPD3O75425 235 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 RPP40O75818 363 aaKnown RBP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 SGPL1O95470 568 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 LDHCP07864 332 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 CHRM5P08912 532 aaPredicted RBP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 UBTFL1P0CB47 393 aaPredicted RBP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 CYP2A6P11509 494 aaPredicted RBP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 SFPQP23246 707 aaKnown RBP eCLIP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 CHKAP35790 457 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 SERPINF1P36955 418 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 PRKCZQ05513 592 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 SLC14A1Q13336 389 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 GAB1Q13480 694 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 BLMHQ13867 455 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 CSHL1Q14406 222 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 KCNB1Q14721 858 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 LARS2Q15031 903 aaKnown RBP5.68□□□□□ -1.5
HIF1A-209ENST00000556827 BTBD16Q32M84 506 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 CCDC184Q52MB2 194 aa5.68□□□□□ -1.5
HIF1A-209ENST00000556827 GORABQ5T7V8 394 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms