RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TNKS2Q9H2K2 1166 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 RETREG1Q9H6L5 497 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 DNAI1Q9UI46 699 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 FZD10Q9ULW2 581 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 FCF1Q9Y324 198 aaKnown RBP10.55□□□□□ -0.72
SHMT2-224ENST00000556737 SNX11Q9Y5W9 270 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 CXorf51AA0A1B0GTR3 108 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 A0A1W2PR77 199 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 ANKRD62A6NC57 917 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 TMEM191CA6NGB0 347 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 C1QTNF3-AMACRE9PGA6 284 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 BNIP3LO60238 219 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 CER1O95813 267 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 WNT1P04628 370 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 GYPCP04921 128 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF883P0CG24 379 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 GZMAP12544 262 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 SKILP12757 684 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 L1CAMP32004 1257 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 CHRNA3P32297 505 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 CTSKP43235 329 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 AIF1P55008 147 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 RACK1P63244 317 aaKnown RBP10.54□□□□□ -0.72
SHMT2-224ENST00000556737 SHC2P98077 582 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 SFSWAPQ12872 951 aaKnown RBP10.54□□□□□ -0.72
SHMT2-224ENST00000556737 SLC14A1Q13336 389 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 KIF19Q2TAC6 998 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 EFHC2Q5JST6 749 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 FAM46CQ5VWP2 391 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 PPP1R2P3Q6NXS1 205 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 DPY19L3Q6ZPD9 716 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 VSTM4Q8IW00 320 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 NAXDQ8IW45 347 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 PCDH20Q8N6Y1 951 aaKnown RBP10.54□□□□□ -0.72
SHMT2-224ENST00000556737 RTL3Q8N8U3 475 aaKnown RBP10.54□□□□□ -0.72
SHMT2-224ENST00000556737 OR14C36Q8NHC7 312 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 GRIN3AQ8TCU5 1115 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 CAMK1GQ96NX5 476 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 SPON2Q9BUD6 331 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 CEP295Q9C0D2 2601 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 GAREM1Q9H706 876 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 PARVAQ9NVD7 372 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 ARHGAP20Q9P2F6 1191 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 FRYQ5TBA9 3013 aa10.54□□□□□ -0.72
SHMT2-224ENST00000556737 SPAARA0A1B0GVQ0 90 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 WASH4PA8MWX3 477 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 VILLO15195 856 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 SH3BP5O60239 455 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 RAMP2O60895 175 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CBFA2T3O75081 653 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 FTLP02792 175 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 PSMA2P25787 234 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 EPHB2P29323 1055 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 ETFBP38117 255 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CCNHP51946 323 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 TEAD4Q15561 434 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CA9Q16790 459 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF423Q2M1K9 1284 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 HLA-BQ31612 363 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 RETSATQ6NUM9 610 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 SCYL2Q6P3W7 929 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 DCUN1D2Q6PH85 259 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 IL27RAQ6UWB1 636 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 TRIM69Q86WT6 500 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 TMIEQ8NEW7 156 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 BAHD1Q8TBE0 780 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 FNIP1Q8TF40 1166 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CPLX3Q8WVH0 158 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 SYN2Q92777 582 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF653Q96CK0 615 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CCDC114Q96M63 670 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 SNRNP25Q9BV90 132 aaKnown RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CNTNAP3Q9BZ76 1288 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 KLC2Q9H0B6 622 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 ISCUQ9H1K1 167 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 MAGEH1Q9H213 219 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 PREBQ9HCU5 417 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 TM7SF3Q9NS93 570 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 GPATCH2LQ9NWQ4 482 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 CNOT8Q9UFF9 292 aaKnown RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 IL36AQ9UHA7 158 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 ANGPTL2Q9UKU9 493 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 PCOLCE2Q9UKZ9 415 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 TPX2Q9ULW0 747 aaKnown RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 NENFQ9UMX5 172 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 ANKRD6Q9Y2G4 727 aa10.53□□□□□ -0.72
SHMT2-224ENST00000556737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 COL5A1P20908 1838 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-224ENST00000556737 H0Y8X5 98 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 KPNA3O00505 521 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-224ENST00000556737 CREB3O43889 395 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 LRCH4O75427 683 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 LEFTY1O75610 366 aa10.52□□□□□ -0.73
SHMT2-224ENST00000556737 TOP3BO95985 862 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms