RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 GRIN3AQ8TCU5 1115 aa23.09■■□□□ 1.29
ACTN1-220ENST00000556433 RAB6CQ9H0N0 254 aa23.09■■□□□ 1.29
ACTN1-220ENST00000556433 FANCLQ9NW38 375 aa23.09■■□□□ 1.29
ACTN1-220ENST00000556433 PPARGC1AQ9UBK2 798 aaKnown RBP23.09■■□□□ 1.29
ACTN1-220ENST00000556433 LHX6Q9UPM6 363 aa23.09■■□□□ 1.29
ACTN1-220ENST00000556433 PCDHGA1Q9Y5H4 931 aa23.09■■□□□ 1.29
ACTN1-220ENST00000556433 KNTC1P50748 2209 aa23.09■■□□□ 1.29
ACTN1-220ENST00000556433 ZZEF1O43149 2961 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 RNF103O00237 685 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 EPHB6O15197 1021 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 ZMPSTE24O75844 475 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 SDC4P31431 198 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 ADRA1BP35368 520 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 STAT1P42224 750 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 DNA2P51530 1060 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 JAM2P57087 298 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 C15orf59Q2T9L4 293 aaPredicted RBP23.08■■□□□ 1.29
ACTN1-220ENST00000556433 ARL13BQ3SXY8 428 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 CCDC14Q49A88 953 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 ERN2Q76MJ5 926 aaKnown RBP23.08■■□□□ 1.29
ACTN1-220ENST00000556433 HORMAD1Q86X24 394 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 MYOCQ99972 504 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 C11orf70Q9BRQ4 267 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 OR12D3Q9UGF7 316 aa23.08■■□□□ 1.29
ACTN1-220ENST00000556433 ZNF821O75541 412 aaPredicted RBP23.07■■□□□ 1.28
ACTN1-220ENST00000556433 LEFTY1O75610 366 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 PCDH8O95206 1070 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 PRLRP16471 622 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 SERPINH1P50454 418 aaKnown RBP23.07■■□□□ 1.28
ACTN1-220ENST00000556433 TRIM72Q6ZMU5 477 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 TMPRSS12Q86WS5 348 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 JOSD2Q8TAC2 188 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 PCMTD1Q96MG8 357 aaPredicted RBP23.07■■□□□ 1.28
ACTN1-220ENST00000556433 HDAC8Q9BY41 377 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 CEP44Q9C0F1 390 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 DOCK9Q9BZ29 2069 aa23.07■■□□□ 1.28
ACTN1-220ENST00000556433 RFPL3O75679 317 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 GJB6O95452 261 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 C1SP09871 688 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 COPB1P53618 953 aaKnown RBP23.06■■□□□ 1.28
ACTN1-220ENST00000556433 ARF5P84085 180 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 CYP4F3Q08477 520 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 CAMK2BQ13554 666 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 ZNF284Q2VY69 593 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 CARD16Q5EG05 197 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 SFMBT2Q5VUG0 894 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 RWDD4Q6NW29 188 aaKnown RBP23.06■■□□□ 1.28
ACTN1-220ENST00000556433 KANSL1Q7Z3B3 1105 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 PCDH20Q8N6Y1 951 aaKnown RBP23.06■■□□□ 1.28
ACTN1-220ENST00000556433 TMEM145Q8NBT3 493 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 GPT2Q8TD30 523 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 PPP1R16AQ96I34 528 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 PCDHB18PQ96TA0 734 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 HEPHQ9BQS7 1158 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 OSBPL2Q9H1P3 480 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 SIK3Q9Y2K2 1263 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 FCF1Q9Y324 198 aaKnown RBP23.06■■□□□ 1.28
ACTN1-220ENST00000556433 DAAM1Q9Y4D1 1078 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 WASF2Q9Y6W5 498 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 TP53BP1Q12888 1972 aaPredicted RBP23.06■■□□□ 1.28
ACTN1-220ENST00000556433 DMXL2Q8TDJ6 3036 aa23.06■■□□□ 1.28
ACTN1-220ENST00000556433 C2CD4BA6NLJ0 364 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 SDC3O75056 442 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 THEGLP0DJG4 465 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 CDK4P11802 303 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 JUPP14923 745 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 AKT2P31751 481 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 ACVRL1P37023 503 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 SYCP1Q15431 976 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 C19orf48Q6RUI8 117 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 RBM43Q6ZSC3 357 aaKnown RBP23.05■■□□□ 1.28
ACTN1-220ENST00000556433 PDCD7Q8N8D1 485 aaKnown RBP23.05■■□□□ 1.28
ACTN1-220ENST00000556433 TSC1Q92574 1164 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 FZD3Q9NPG1 666 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 ADAM22Q9P0K1 906 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 ZFR2Q9UPR6 939 aaKnown RBP23.05■■□□□ 1.28
ACTN1-220ENST00000556433 RAXQ9Y2V3 346 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 ACTL7AQ9Y615 435 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 ACACAQ13085 2346 aa23.05■■□□□ 1.28
ACTN1-220ENST00000556433 ANKRD11Q6UB99 2663 aaPredicted RBP23.04■■□□□ 1.28
ACTN1-220ENST00000556433 KRT3P12035 628 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 UNGP13051 313 aaPredicted RBP23.04■■□□□ 1.28
ACTN1-220ENST00000556433 RHOQP17081 205 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 HNRNPA2B1P22626 353 aaKnown RBP23.04■■□□□ 1.28
ACTN1-220ENST00000556433 ANP32AP39687 249 aaKnown RBP23.04■■□□□ 1.28
ACTN1-220ENST00000556433 PTPN9P43378 593 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 NSFP46459 744 aaKnown RBP23.04■■□□□ 1.28
ACTN1-220ENST00000556433 ACADVLP49748 655 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 NRG1Q02297 640 aaPredicted RBP23.04■■□□□ 1.28
ACTN1-220ENST00000556433 PTP4A2Q12974 167 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 SASS6Q6UVJ0 657 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 STRADAQ7RTN6 431 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 ANKRD20A12PQ8NF67 263 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 NEK11Q8NG66 645 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 MAGEB5Q9BZ81 275 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 RETREG1Q9H6L5 497 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 NDFIP2Q9NV92 336 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 KLHL11Q9NVR0 708 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 DKK4Q9UBT3 224 aa23.04■■□□□ 1.28
ACTN1-220ENST00000556433 DNAI1Q9UI46 699 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms