RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 OBP2BQ9NPH6 170 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 CD93Q9NPY3 652 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 CFDP1Q9UEE9 299 aaPredicted RBP5.5□□□□□ -1.53
PRPF39-209ENST00000556353 SLC25A13Q9UJS0 675 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 PCDHA10Q9Y5I2 948 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 A2ML1A8K2U0 1454 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 IQSEC2Q5JU85 1478 aa5.5□□□□□ -1.53
PRPF39-209ENST00000556353 MAP3K1Q13233 1512 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 SRCAPQ6ZRS2 3230 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 PAPSS2O95340 614 aaPredicted RBP5.49□□□□□ -1.53
PRPF39-209ENST00000556353 LCATP04180 440 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 CHRNB2P17787 502 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 TNFSF8P32971 234 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 CYP2J2P51589 502 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 SELENOVP59797 346 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 ZP1P60852 638 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 ZBTB16Q05516 673 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 CRYZQ08257 329 aaKnown RBP5.49□□□□□ -1.53
PRPF39-209ENST00000556353 PTK2BQ14289 1009 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 NFATC4Q14934 902 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
PRPF39-209ENST00000556353 VWA5B1Q5TIE3 1220 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 NADSYN1Q6IA69 706 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 CCSAPQ6IQ19 270 aaPredicted RBP5.49□□□□□ -1.53
PRPF39-209ENST00000556353 TMEM217Q8N7C4 229 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 LRRC57Q8N9N7 239 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 ZNF527Q8NB42 609 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 CMASQ8NFW8 434 aaPredicted RBP5.49□□□□□ -1.53
PRPF39-209ENST00000556353 ELAC2Q9BQ52 826 aaKnown RBP5.49□□□□□ -1.53
PRPF39-209ENST00000556353 RTKNQ9BST9 563 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 BRD8Q9H0E9 1235 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 VPS33BQ9H267 617 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 PDE11AQ9HCR9 933 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 LZTS1Q9Y250 596 aa5.49□□□□□ -1.53
PRPF39-209ENST00000556353 DHX29Q7Z478 1369 aaKnown RBP5.48□□□□□ -1.53
PRPF39-209ENST00000556353 TCRBV7S3A2A0A539 114 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 SAC3D1A6NKF1 404 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 ITGA2BP08514 1039 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 GYS1P13807 737 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 CDK7P50613 346 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 TBX4P57082 545 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 DSCR9P59020 149 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 Q0VFX4 171 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 TRAF1Q13077 416 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 PLK5Q496M5 336 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 FNBP1LQ5T0N5 605 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 FAM171A1Q5VUB5 890 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 NFRKBQ6P4R8 1299 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 GGT6Q6P531 493 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 RAB11FIP2Q7L804 512 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 OR1N1Q8NGS0 311 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 BICD2Q8TD16 824 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 KATNAL1Q9BW62 490 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 POLDIP3Q9BY77 421 aaKnown RBP5.48□□□□□ -1.53
PRPF39-209ENST00000556353 HIPK3Q9H422 1215 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 PIK3C2BO00750 1634 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 MYOM3Q5VTT5 1437 aa5.48□□□□□ -1.53
PRPF39-209ENST00000556353 TCF20Q9UGU0 1960 aaKnown RBP5.47□□□□□ -1.53
PRPF39-209ENST00000556353 SYNMO15061 1565 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 ERVK-7P63135 1459 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 SHANK2Q9UPX8 1470 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 LGALS16A8MUM7 142 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 STMND1H3BQB6 276 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 HEXIM1O94992 359 aaKnown RBP5.47□□□□□ -1.53
PRPF39-209ENST00000556353 HLA-DQA2P01906 255 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 PRPH2P23942 346 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 RFX5P48382 616 aaPredicted RBP5.47□□□□□ -1.53
PRPF39-209ENST00000556353 DSC1Q08554 894 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 DUSP6Q16828 381 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 C5orf22Q49AR2 442 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 PGBD2Q6P3X8 592 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 KIAA1324Q6UXG2 1013 aaKnown RBP5.47□□□□□ -1.53
PRPF39-209ENST00000556353 EID2BQ96D98 161 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 HDHD5Q9BXW7 423 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 TM6SF1Q9BZW5 370 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 RAP2CQ9Y3L5 183 aa5.47□□□□□ -1.53
PRPF39-209ENST00000556353 KDM5AP29375 1690 aaKnown RBP5.47□□□□□ -1.53
PRPF39-209ENST00000556353 MS4A18H0YCH9 400 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 GRM8O00222 908 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 ACTL6BO94805 426 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 PKMP14618 531 aaKnown RBP5.46□□□□□ -1.54
PRPF39-209ENST00000556353 TMPRSS3P57727 454 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 ABATP80404 500 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 CDK18Q07002 472 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 RPS6KA2Q15349 733 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 ZACNQ401N2 412 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 XRRA1Q6P2D8 792 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 RINLQ6ZS11 566 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 RBM23Q86U06 439 aaKnown RBP5.46□□□□□ -1.54
PRPF39-209ENST00000556353 SLC2A12Q8TD20 617 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 CPT1BQ92523 772 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 TRIM31Q9BZY9 425 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 TMEM248Q9NWD8 314 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 ZDHHC7Q9NXF8 308 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 HERC5Q9UII4 1024 aaKnown RBP5.46□□□□□ -1.54
PRPF39-209ENST00000556353 BAG5Q9UL15 447 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 DAPP1Q9UN19 280 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 C19orf53Q9UNZ5 99 aaPredicted RBP5.46□□□□□ -1.54
PRPF39-209ENST00000556353 LRCH1Q9Y2L9 728 aa5.46□□□□□ -1.54
PRPF39-209ENST00000556353 GCC2Q8IWJ2 1684 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms