RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CYP3A7-CYP3A51PA0A087WV96 503 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 LOC105369274A0A096LPK9 316 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 LOC102723532A0A0G2JNH3 316 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 ABHD14A-ACY1A0A1B0GW23 586 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 C3orf70A6NLC5 250 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-218ENST00000556256 J3KTA2 159 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 FGF18O76093 207 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 LDHAP00338 332 aaKnown RBP3.5□□□□□ -1.85
SCFD1-218ENST00000556256 MYZAPP0CAP1 466 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 MYL4P12829 197 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 KRT5P13647 590 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 AZU1P20160 251 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 TNFSF4P23510 183 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 DGKAP23743 735 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 CYP3A7P24462 503 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 GABRB3P28472 473 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 STT3AP46977 705 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 CDH12P55289 794 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 PHEXP78562 749 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 DLG1Q12959 904 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 IZUMO3Q5VZ72 239 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 HIBCHQ6NVY1 386 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-218ENST00000556256 GDPD4Q6W3E5 623 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 TRMT1LQ7Z2T5 733 aaKnown RBP3.5□□□□□ -1.85
SCFD1-218ENST00000556256 TTC30AQ86WT1 665 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 OR4N4Q8N0Y3 316 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 FAM110DQ8TAY7 271 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-218ENST00000556256 TMEM163Q8TC26 289 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 GDF15Q99988 308 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 EVA1AQ9H8M9 152 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 MYO1AQ9UBC5 1043 aa3.5□□□□□ -1.85
SCFD1-218ENST00000556256 PNMA6EA0A0J9YXQ4 647 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 TCRBV7S3A2A0A539 114 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 AMBPP02760 352 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 CYP3A4P08684 503 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 SETSIPP0DME0 302 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 IDEP14735 1019 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 EGR1P18146 543 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 FGFR2P21802 821 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 MXI1P50539 228 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 RPL15P61313 204 aaKnown RBP3.49□□□□□ -1.85
SCFD1-218ENST00000556256 BTKQ06187 659 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 PMS2P11Q13670 270 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 KRT72Q14CN4 511 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 PLK5Q496M5 336 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 FAM209BQ5JX69 171 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 LRRC8CQ8TDW0 803 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 KIAA1191Q96A73 305 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 PLCB1Q9NQ66 1216 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 SLC12A4Q9UP95 1085 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 DAAM1Q9Y4D1 1078 aa3.49□□□□□ -1.85
SCFD1-218ENST00000556256 NPIPB11E5RHQ5 1161 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 HSPB6O14558 160 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 APOL1O14791 398 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 PEX5P50542 639 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 RBM6P78332 1123 aaKnown RBP3.48□□□□□ -1.85
SCFD1-218ENST00000556256 MYBPC2Q14324 1141 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 VWA5B1Q5TIE3 1220 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 RHBDF2Q6PJF5 856 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 RASGRP3Q8IV61 690 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 PGBD5Q8N414 524 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 MAB21L3Q8N8X9 362 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 TXNDC15Q96J42 360 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 ARPC5LQ9BPX5 153 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 WDR12Q9GZL7 423 aaKnown RBP3.48□□□□□ -1.85
SCFD1-218ENST00000556256 ARL15Q9NXU5 204 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 RIPOR2Q9Y4F9 1068 aa3.48□□□□□ -1.85
SCFD1-218ENST00000556256 IGKV3D-15A0A087WSY6 115 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 A0A0U1RQJ8 604 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 TPD52L2O43399 206 aaKnown RBP3.47□□□□□ -1.85
SCFD1-218ENST00000556256 EDIL3O43854 480 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 NDST3O95803 873 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 CER1O95813 267 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 CRYAAP02489 173 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 ENO3P13929 434 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-218ENST00000556256 PPM1AP35813 382 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 OS9Q13438 667 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-218ENST00000556256 MAPKAPK3Q16644 382 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 MPEG1Q2M385 716 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 SLC35G1Q2M3R5 365 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 FAM83BQ5T0W9 1011 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 C10orf62Q5T681 223 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-218ENST00000556256 PLA2G4FQ68DD2 849 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 TUBA1AQ71U36 451 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 BEND5Q7L4P6 421 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 ANKS1BQ7Z6G8 1248 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 TMEM200AQ86VY9 491 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 CCDC33Q8N5R6 958 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 TEX45Q8NA69 505 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 TUBA1CQ9BQE3 449 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 CERS4Q9HA82 394 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 UBTD1Q9HAC8 227 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 RAB21Q9UL25 225 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 SLC45A1Q9Y2W3 748 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 NFS1Q9Y697 457 aa3.47□□□□□ -1.85
SCFD1-218ENST00000556256 FAM172BPA6NC97 362 aa3.46□□□□□ -1.86
SCFD1-218ENST00000556256 IFRD1O00458 451 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-218ENST00000556256 PLA2G6O60733 806 aa3.46□□□□□ -1.86
SCFD1-218ENST00000556256 TMCC1O94876 653 aa3.46□□□□□ -1.86
SCFD1-218ENST00000556256 HARSP12081 509 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms