RNA–Protein interactions for RNA: ENST00000556033.5

LINC01146-204, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 1 (best) BASIC

Gene LINC01146, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-204ENST00000556033 VPS28Q9UK41 221 aa10.05□□□□□ -0.8
LINC01146-204ENST00000556033 PCDHGA8Q9Y5G5 932 aa10.05□□□□□ -0.8
LINC01146-204ENST00000556033 ENTPD2Q9Y5L3 495 aa10.05□□□□□ -0.8
LINC01146-204ENST00000556033 CCDC187A0A096LP49 1063 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 A0A1B0GVL5 298 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 TCAF2A6NFQ2 919 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 TCEA3O75764 348 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 NTRK1P04629 796 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 PAEPP09466 180 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 GIMD1P0DJR0 217 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 SFTPCP11686 197 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 BRD2P25440 801 aaKnown RBP10.04□□□□□ -0.8
LINC01146-204ENST00000556033 MLLT3P42568 568 aaPredicted RBP10.04□□□□□ -0.8
LINC01146-204ENST00000556033 RECQLP46063 649 aaPredicted RBP10.04□□□□□ -0.8
LINC01146-204ENST00000556033 INHBCP55103 352 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 TAS2R38P59533 333 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 SRSF1Q07955 248 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01146-204ENST00000556033 CNGA2Q16280 664 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 DEFB133Q30KQ1 61 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 CBWD6Q4V339 395 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 CBWD3Q5JTY5 395 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 CBWD5Q5RIA9 395 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 PIP5KL1Q5T9C9 394 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 ZNF574Q6ZN55 896 aaPredicted RBP10.04□□□□□ -0.8
LINC01146-204ENST00000556033 PARGQ86W56 976 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 SLC22A18ASQ8N1D0 253 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 GUF1Q8N442 669 aaKnown RBP10.04□□□□□ -0.8
LINC01146-204ENST00000556033 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 EXTL1Q92935 676 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 FAM131CQ96AQ9 280 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 SLC39A13Q96H72 371 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 PPP1R16AQ96I34 528 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 NOX5Q96PH1 765 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 CAAP1Q9H8G2 361 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 FAM204AQ9H8W3 233 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 USP9XQ93008 2570 aaPredicted RBP10.04□□□□□ -0.8
LINC01146-204ENST00000556033 LRRK1Q38SD2 2015 aa10.04□□□□□ -0.8
LINC01146-204ENST00000556033 SPTBN1Q01082 2364 aaKnown RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 LY6G6EA0A0G2JKS1 128 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 EME2A4GXA9 379 aaPredicted RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 CDRT15L2A8MXV6 281 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 KCNU1A8MYU2 1149 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 FPGTO14772 594 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 AQP9O43315 295 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 ATP9BO43861 1147 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 RHOBTB3O94955 611 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 TRUB2O95900 331 aaKnown RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 PAK4O96013 591 aaPredicted RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 PRNPP04156 253 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 HSP90AA1P07900 732 aaKnown RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 ITGA2BP08514 1039 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 PFKFB1P16118 471 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 JUNDP17535 347 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 CHRNA3P32297 505 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 RABIFP47224 123 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 PLK1P53350 603 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 KRT83P78385 493 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 SGCGQ13326 291 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 PDE1CQ14123 709 aaPredicted RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 DRAP1Q14919 205 aaPredicted RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 ZNF284Q2VY69 593 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 SYPL2Q5VXT5 272 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 SEL1L3Q68CR1 1132 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 BLOC1S3Q6QNY0 202 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 XKR5Q6UX68 686 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 GCNT7Q6ZNI0 430 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 ERN2Q76MJ5 926 aaKnown RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 C14orf80Q86SX3 495 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 PPM1KQ8N3J5 372 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 SH2D3CQ8N5H7 860 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 EXD3Q8N9H8 876 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 WDR48Q8TAF3 677 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 TFAP2BQ92481 460 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 SGF29Q96ES7 293 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 TSG101Q99816 390 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 FEM1AQ9BSK4 669 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 SLC17A9Q9BYT1 436 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 STRADBQ9C0K7 418 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 EPB41L5Q9HCM4 733 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 ATXN7L1Q9ULK2 861 aaPredicted RBP10.03□□□□□ -0.8
LINC01146-204ENST00000556033 DOLKQ9UPQ8 538 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 HS3ST3A1Q9Y663 406 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 U3KQA8 63 aa10.03□□□□□ -0.8
LINC01146-204ENST00000556033 ARHGEF17Q96PE2 2063 aaPredicted RBP10.02□□□□□ -0.81
LINC01146-204ENST00000556033 ANKRD36A6QL64 1941 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 SPTY2D1-AS1A0A0U1RR47 76 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 A0A1W2PNU3 283 aaPredicted RBP10.02□□□□□ -0.81
LINC01146-204ENST00000556033 CSF2P04141 144 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 FYNP06241 537 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 FAM87AP0C7U9 286 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 SLC2A3P11169 496 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 NME1P15531 152 aaKnown RBP10.02□□□□□ -0.81
LINC01146-204ENST00000556033 CCR1P32246 355 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 SYKP43405 635 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 ACADSBP45954 432 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 THOP1P52888 689 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 RPS21P63220 83 aaKnown RBP10.02□□□□□ -0.81
LINC01146-204ENST00000556033 SKOR1P84550 965 aa10.02□□□□□ -0.81
LINC01146-204ENST00000556033 EDRF1Q3B7T1 1238 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms