RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 SERAC1Q96JX3 654 aa10.52□□□□□ -0.73
EFCAB11-208ENST00000555872 LRGUKQ96M69 825 aa10.52□□□□□ -0.73
EFCAB11-208ENST00000555872 FRMD8Q9BZ67 464 aaPredicted RBP10.52□□□□□ -0.73
EFCAB11-208ENST00000555872 CD209Q9NNX6 404 aa10.52□□□□□ -0.73
EFCAB11-208ENST00000555872 POLLQ9UGP5 575 aa10.52□□□□□ -0.73
EFCAB11-208ENST00000555872 CLUHO75153 1309 aa10.52□□□□□ -0.73
EFCAB11-208ENST00000555872 SF3B1O75533 1304 aaKnown RBP eCLIP10.52□□□□□ -0.732e-6■■■■■ 124.1
EFCAB11-208ENST00000555872 FOCADQ5VW36 1801 aa10.52□□□□□ -0.73
EFCAB11-208ENST00000555872 DENND3A2RUS2 1198 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 DYNC1LI2O43237 492 aaPredicted RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 SERPINA6P08185 405 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 BMP3P12645 472 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 EPB42P16452 691 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 ZNF23P17027 643 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 CDH5P33151 784 aaPredicted RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 SHMT1P34896 483 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 CASP2P42575 452 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 KLF1Q13351 362 aaPredicted RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 PEX6Q13608 980 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 TBCCQ15814 346 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 RARS2Q5T160 578 aaKnown RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 NANOGP8Q6NSW7 305 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 TAS2R42Q7RTR8 314 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 SLC47A2Q86VL8 602 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 NPAS4Q8IUM7 802 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 PM20D2Q8IYS1 436 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 DEFB107AQ8IZN7 70 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 ZNF444Q8N0Y2 327 aaPredicted RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 HPS1Q92902 700 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 ZNF566Q969W8 418 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 HEXIM2Q96MH2 286 aaKnown RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 RANBP9Q96S59 729 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 APBA2Q99767 749 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 EIF2AK1Q9BQI3 630 aaKnown RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 COA1Q9GZY4 146 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 NARFLQ9H6Q4 476 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 MVB12BQ9H7P6 319 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 ARNT2Q9HBZ2 717 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 ANLNQ9NQW6 1124 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 OLFML3Q9NRN5 406 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 UBA2Q9UBT2 640 aaPredicted RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 EBF1Q9UH73 591 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 PACSIN3Q9UKS6 424 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 VWA7Q9Y334 891 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 SNCAIPQ9Y6H5 919 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 BRCA1P38398 1863 aaKnown RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 TMX2-CTNND1H3BSU7 103 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 GLRA2P23416 452 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 VAMP1P23763 118 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 GSTM2P28161 218 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 HSPA13P48723 471 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 GAD2Q05329 585 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 SWSAP1Q6NVH7 229 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 ZNF366Q8N895 744 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 OR8K3Q8NH51 312 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 RAET1EQ8TD07 263 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 BORCS5Q969J3 196 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 EYA3Q99504 573 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 KLC2Q9H0B6 622 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 KLHL25Q9H0H3 589 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 PTBP2Q9UKA9 531 aaKnown RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 FARP1Q9Y4F1 1045 aaPredicted RBP10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 SNED1Q8TER0 1413 aa10.51□□□□□ -0.73
EFCAB11-208ENST00000555872 LOC100653049A0A140TA62 436 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 KRT34O76011 436 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 AOC1P19801 751 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 SLC12A2P55011 1212 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 S100A12P80511 92 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 ALCAMQ13740 583 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 ZNF829Q3KNS6 432 aaPredicted RBP10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 CES4AQ5XG92 561 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 DPP9Q86TI2 863 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 FNIP1Q8TF40 1166 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 DCAKDQ8WVC6 231 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 THAP11Q96EK4 314 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 APOPT1Q96IL0 206 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 TRIM56Q9BRZ2 755 aaKnown RBP10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 IMPG2Q9BZV3 1241 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 MCCC2Q9HCC0 563 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 XPNPEP1Q9NQW7 623 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 IGSF9Q9P2J2 1179 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 TINAGQ9UJW2 476 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 DNPEPQ9ULA0 475 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 VPS4AQ9UN37 437 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 PSMD13Q9UNM6 376 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 CCDC78A2IDD5 438 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 HOXC11O43248 304 aaPredicted RBP10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 HMGN1P05114 100 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 NMT1P30419 496 aaKnown RBP10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 RFC1P35251 1148 aaPredicted RBP10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 PTGER2P43116 358 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 RPP30P78346 268 aaKnown RBP10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 CHI3L2Q15782 390 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 HIF1AQ16665 826 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 SBK1Q52WX2 424 aa10.5□□□□□ -0.73
EFCAB11-208ENST00000555872 CDHR3Q6ZTQ4 885 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms