RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CTHP32929 405 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 KCNJ1P48048 391 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 ZP2Q05996 745 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 RAD51Q06609 339 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 CUL1Q13616 776 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 HLTFQ14527 1009 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHMT2-220ENST00000555634 GRM3Q14832 879 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 ACCSLQ4AC99 568 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 TEX44Q53QW1 395 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 FSCBQ5H9T9 825 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 RALGPS1Q5JS13 557 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 ANKRD20A2Q5SQ80 823 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 ANKRD20A1Q5TYW2 823 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 ANKRD20A3Q5VUR7 823 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 SDE2Q6IQ49 451 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 POTEHQ6S545 545 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 PID1Q7Z2X4 250 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 ETFBKMTQ8IXQ9 262 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 NOA1Q8NC60 698 aaKnown RBP11.4□□□□□ -0.58
SHMT2-220ENST00000555634 NETO2Q8NC67 525 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 WFDC5Q8TCV5 224 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 MAML1Q92585 1016 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 AGAP3Q96P47 875 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 NT5MQ9NPB1 228 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 SLC2A4RGQ9NR83 387 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 RBM22Q9NW64 420 aaKnown RBP eCLIP11.4□□□□□ -0.588e-10■■■■■ 40.7
SHMT2-220ENST00000555634 MTRF1LQ9UGC7 380 aaKnown RBP11.4□□□□□ -0.58
SHMT2-220ENST00000555634 DUSP12Q9UNI6 340 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 MYO10Q9HD67 2058 aa11.4□□□□□ -0.58
SHMT2-220ENST00000555634 TCF20Q9UGU0 1960 aaKnown RBP11.39□□□□□ -0.59
SHMT2-220ENST00000555634 J3KR12 359 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 ARNTLO00327 626 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 TMCC1O94876 653 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 JCHAINP01591 159 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 ASGR2P07307 311 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 DLDP09622 509 aaKnown RBP11.39□□□□□ -0.59
SHMT2-220ENST00000555634 DRD1P21728 446 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 NFKBIAP25963 317 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 GEMP55040 296 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 AP1S1P61966 158 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 SNRPD1P62314 119 aaKnown RBP11.39□□□□□ -0.59
SHMT2-220ENST00000555634 GUCY2DQ02846 1103 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 TRIP13Q15645 432 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-220ENST00000555634 PARP6Q2NL67 630 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 MAP9Q49MG5 647 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 C22orf39Q6P5X5 142 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 SERPINA13PQ6UXR4 307 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 LINGO4Q6UY18 593 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 ARHGAP36Q6ZRI8 547 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 DSG4Q86SJ6 1040 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 PPIL6Q8IXY8 311 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 UBALD2Q8IYN6 164 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 APCDD1Q8J025 514 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 RYBPQ8N488 228 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-220ENST00000555634 PCDH20Q8N6Y1 951 aaKnown RBP11.39□□□□□ -0.59
SHMT2-220ENST00000555634 KDM1BQ8NB78 822 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 CCDC110Q8TBZ0 833 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 USP33Q8TEY7 942 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 IL12RB2Q99665 862 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 ERP44Q9BS26 406 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 TRIM51Q9BSJ1 452 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 LRRC1Q9BTT6 524 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 TRIM31Q9BZY9 425 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 TSPYL1Q9H0U9 437 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 PDFQ9HBH1 243 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 RAB6BQ9NRW1 208 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 ARGLU1Q9NWB6 273 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-220ENST00000555634 SHOC2Q9UQ13 582 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 ERVW-1Q9UQF0 538 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 HS3ST2Q9Y278 367 aa11.39□□□□□ -0.59
SHMT2-220ENST00000555634 VCANP13611 3396 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ZBTB24O43167 697 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 SNAP91O60641 907 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ERLIN1O75477 346 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 APRTP07741 180 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 SERPINF2P08697 491 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 TNFRSF4P43489 277 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 GDF10P55107 478 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ARF5P84085 180 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 PRKCQQ04759 706 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ZBTB17Q13105 803 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 LRRC32Q14392 662 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 STARD3Q14849 445 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 MLF2Q15773 248 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-220ENST00000555634 GEN1Q17RS7 908 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 FBXO43Q4G163 708 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 IZUMO3Q5VZ72 239 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 NAPEPLDQ6IQ20 393 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ZNF852Q6ZMS4 543 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 TPRG1Q6ZUI0 275 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 LINC00523Q86TU6 105 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 HOOK3Q86VS8 718 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 C12orf40Q86WS4 652 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 ZNF567Q8N184 647 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 TEX26Q8N6G2 289 aa11.38□□□□□ -0.59
SHMT2-220ENST00000555634 GPR161Q8N6U8 529 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms