RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 SLC30A4O14863 429 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RASA4O43374 803 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 KDELR3O43731 214 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 FOXD2O60548 495 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MFAP3LO75121 409 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ADH1BP00325 375 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SERPINF2P08697 491 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ENGP17813 658 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 C5AR1P21730 350 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MAPK8P45983 427 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 AIF1P55008 147 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TPI1P60174 286 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CNTN1Q12860 1018 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SMTNL2Q2TAL5 461 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PPP6R3Q5H9R7 873 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 C22orf39Q6P5X5 142 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NCEH1Q6PIU2 408 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SARM1Q6SZW1 724 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DPY19L3Q6ZPD9 716 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ZNF354CQ86Y25 554 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 OR14C36Q8NHC7 312 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 C1orf216Q8TAB5 229 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CEP76Q8TAP6 659 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PIP4K2CQ8TBX8 421 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 HMCESQ96FZ2 354 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CELF6Q96J87 481 aaKnown RBP12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CATSPERBQ9H7T0 1116 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NHEJ1Q9H9Q4 299 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 EBF2Q9HAK2 575 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CAPN10Q9HC96 672 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SPTLC3Q9NUV7 552 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CWC15Q9P013 229 aaKnown RBP12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ANAPC7Q9UJX3 599 aa12.67□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3EA0A087X179 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3KA0A087X1G2 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3FA6NER0 549 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3LB9A6J9 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MYO1FO00160 1098 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TM4SF5O14894 197 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DAPK3O43293 454 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 BUB1O43683 1085 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 AKR1B10O60218 316 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 IGHV4-34P06331 123 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TPM1P09493 284 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3HP0C7X1 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ERCC2P18074 760 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 GKP32189 559 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PCK1P35558 622 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CSNK1EP49674 416 aaKnown RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SERPINH1P50454 418 aaKnown RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PIGHQ14442 188 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 UAP1L1Q3KQV9 507 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ATP13A4Q4VNC1 1196 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CARD16Q5EG05 197 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 KIAA0895LQ68EN5 471 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3GQ6DHY5 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3CQ6IPX1 549 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RFX8Q6ZV50 586 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DGLUCYQ7Z3D6 616 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TP53INP2Q8IXH6 220 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TBC1D3Q8IZP1 549 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ZCCHC9Q8N567 271 aaKnown RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TMIEQ8NEW7 156 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 HSPH1Q92598 858 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ARRDC3Q96B67 414 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RTKNQ9BST9 563 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 GTPBP2Q9BX10 602 aaKnown RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 TM6SF2Q9BZW4 377 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SLC39A8Q9C0K1 460 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 CTTNBP2NLQ9P2B4 639 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 IP6K2Q9UHH9 426 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 MFHAS1Q9Y4C4 1052 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 NUP205Q92621 2012 aa12.66□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PLXND1Q9Y4D7 1925 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SSU72P8A0A1W2PR75 194 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 J3KR12 359 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 KPNA3O00505 521 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ALOX15BO15296 676 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 BCAT2O15382 392 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 LEFTY1O75610 366 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 RARAP10276 462 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 GNSP15586 552 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SDHBP21912 280 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 AMPD1P23109 780 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 HOXD12P35452 270 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ETFBP38117 255 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 DPP6P42658 865 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 SSR1P43307 286 aaKnown RBP12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 PAPOLAP51003 745 aaKnown RBP12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 ZNF75DP51815 510 aa12.65□□□□□ -0.38
TRAPPC6B-205ENST00000555269 LIMK1P53667 647 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms