RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TAOK3Q9H2K8 898 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 MROH8Q9H579 483 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 ALKBH4Q9NXW9 302 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 HDAC6Q9UBN7 1215 aa5.44□□□□□ -1.54
SCFD1-211ENST00000554437 NCAM2O15394 837 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 IL1AP01583 271 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 PYGLP06737 847 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 FGF2P09038 288 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 UNGP13051 313 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-211ENST00000554437 TBXAS1P24557 533 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-211ENST00000554437 CLCNKBP51801 687 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 PPATQ06203 517 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 NAA25Q14CX7 972 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 ZNF260Q3ZCT1 412 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 NAPEPLDQ6IQ20 393 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 CAMK1DQ8IU85 385 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 CD180Q99467 661 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 GRHL1Q9NZI5 618 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 NLKQ9UBE8 527 aa5.43□□□□□ -1.54
SCFD1-211ENST00000554437 LRRFIP2Q9Y608 721 aaKnown RBP5.43□□□□□ -1.54
SCFD1-211ENST00000554437 GAGE12JA6NER3 117 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 MYMKA6NI61 221 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 B4DGG1 531 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 H0YGN5 161 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 RNMTO43148 476 aaKnown RBP5.42□□□□□ -1.54
SCFD1-211ENST00000554437 KLKB1P03952 638 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 SCP2P22307 547 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 PGM1P36871 562 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 TLE2Q04725 743 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 POU5F1BQ06416 359 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.42□□□□□ -1.54
SCFD1-211ENST00000554437 TRPC3Q13507 836 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 SLC18A3Q16572 532 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 LEXMQ3ZCV2 418 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 FBXO43Q4G163 708 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 Q5PR19 223 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 WASHC2DQ5SRD0 308 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 WDR78Q5VTH9 848 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 SLC16A12Q6ZSM3 486 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 HORMAD2Q8N7B1 307 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 KDM1BQ8NB78 822 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 DNAAF1Q8NEP3 725 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 HSPH1Q92598 858 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 CNOT9Q92600 299 aaKnown RBP5.42□□□□□ -1.54
SCFD1-211ENST00000554437 INPP5DQ92835 1189 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 GPR63Q9BZJ6 419 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 FAM234AQ9H0X4 552 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 ISCUQ9H1K1 167 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 CXorf56Q9H5V9 222 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 TMEM160Q9NX00 188 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 GGA3Q9NZ52 723 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 FBXO40Q9UH90 709 aa5.42□□□□□ -1.54
SCFD1-211ENST00000554437 C17orf102A2RUQ5 167 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 DDTLA6NHG4 134 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 FAM90A7PA6NKC0 464 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 FAM90A22PA8MWA6 464 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 FAM90A12PA8MX19 464 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 FAM90A23PA8MXZ1 464 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 STMND1H3BQB6 276 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 KIF1CO43896 1103 aaKnown RBP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 CRYABP02511 175 aaKnown RBP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 CD53P19397 219 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 RFC1P35251 1148 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 DPP6P42658 865 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 POLD2P49005 469 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 CCT4P50991 539 aaKnown RBP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 PKP1Q13835 747 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 NFIL3Q16649 462 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 ODF3L2Q3SX64 289 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 PARM1Q6UWI2 310 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 TRIM74Q86UV6 250 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 TRIM73Q86UV7 250 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 ZNF333Q96JL9 665 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 WDR77Q9BQA1 342 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 LMAN2LQ9H0V9 348 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 SIRT3Q9NTG7 399 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-211ENST00000554437 ATP8A2Q9NTI2 1148 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 SWAP70Q9UH65 585 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 HSF4Q9ULV5 492 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 CNPY2Q9Y2B0 182 aa5.41□□□□□ -1.54
SCFD1-211ENST00000554437 HSPB6O14558 160 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 SERPINC1P01008 464 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 CHRM4P08173 479 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 IFIT1P09914 478 aaKnown RBP5.4□□□□□ -1.54
SCFD1-211ENST00000554437 YWHAQP27348 245 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 P2RX3P56373 397 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 LMOD3Q0VAK6 560 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 RPE65Q16518 533 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 TBC1D9BQ66K14 1250 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 AWAT2Q6E213 333 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 RETSATQ6NUM9 610 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 KRBA2Q6ZNG9 492 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 LRRC8DQ7L1W4 858 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 ADGRG6Q86SQ4 1221 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 SERPINA11Q86U17 422 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 LSM14AQ8ND56 463 aaKnown RBP5.4□□□□□ -1.54
SCFD1-211ENST00000554437 ATOH1Q92858 354 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-211ENST00000554437 HVCN1Q96D96 273 aa5.4□□□□□ -1.54
SCFD1-211ENST00000554437 CLSTN3Q9BQT9 956 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms