RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 LYPLA1O75608 230 aaPredicted RBP14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 IL1BP01584 269 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 TRMT10BQ6PF06 316 aaKnown RBP14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 C4orf22Q6V702 233 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 RNF19BQ6ZMZ0 732 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 NPAS4Q8IUM7 802 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 NUDCD3Q8IVD9 361 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 C7orf26Q96N11 449 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 HBS1LQ9Y450 684 aaKnown RBP14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 CDH23Q9H251 3354 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 A0A088AWK7 358 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 HMX2A2RU54 273 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 DFFAO00273 331 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 BUD23O43709 281 aaKnown RBP14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 OPHN1O60890 802 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 USP12O75317 370 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 HCAR3P49019 387 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 DUSP4Q13115 394 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 SEMA5AQ13591 1074 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 TRIM60Q495X7 471 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 RALGPS1Q5JS13 557 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 MROH9Q5TGP6 573 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 LPCAT4Q643R3 524 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 TMCO2Q7Z6W1 182 aaPredicted RBP14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 MON1AQ86VX9 555 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 MIB1Q86YT6 1006 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 SCML4Q8N228 414 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 EFCAB3Q8N7B9 438 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 FUBP3Q96I24 572 aaKnown RBP eCLIP14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 TRIM62Q9BVG3 475 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 SAGE1Q9NXZ1 904 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 GMIPQ9P107 970 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 SIRPGQ9P1W8 387 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 PDP2Q9P2J9 529 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 OGDHLQ9ULD0 1010 aa14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 MAGED2Q9UNF1 606 aaPredicted RBP14.93□□□□□ -0.02
PPP4R3A-201ENST00000554308 FRMPD3Q5JV73 1810 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 IGLV3-25P01717 112 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SNRPAP09012 282 aaKnown RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 RPL17P18621 184 aaKnown RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 CPOXP36551 454 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 MAGEA6P43360 314 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 TRMT5Q32P41 509 aaKnown RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 FAM117BQ6P1L5 589 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 MCUQ8NE86 351 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 BCL7CQ8WUZ0 217 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SIGLEC10Q96LC7 697 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 GORASP1Q9BQQ3 440 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SMOC2Q9H3U7 446 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 PRDM16Q9HAZ2 1276 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 MPP6Q9NZW5 540 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SLC17A6Q9P2U8 582 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 ZBTB24O43167 697 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SPATA31D3P0C874 917 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 PTPN3P26045 913 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 ALDH7A1P49419 539 aaKnown RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 AP2B1P63010 937 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 EFEMP1Q12805 493 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 EIF4EBP2Q13542 120 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 MRPL58Q14197 206 aaKnown RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 GSTA3Q16772 222 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SFT2D3Q587I9 215 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 RASIP1Q5U651 963 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SLC39A5Q6ZMH5 540 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 UNC5AQ6ZN44 842 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 SPATA31D4Q6ZUB0 917 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 GIPC2Q8TF65 315 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 APBB2Q92870 758 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 AZIN2Q96A70 460 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 ZNF778Q96MU6 729 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 NR1H4Q96RI1 486 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 FRMD8Q9BZ67 464 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 WWP1Q9H0M0 922 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 OCEL1Q9H607 264 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 NDFIP2Q9NV92 336 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 UBP1Q9NZI7 540 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 CDY1Q9Y6F8 540 aa14.92□□□□□ -0.02
PPP4R3A-201ENST00000554308 WDR27A2RRH5 827 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 ARHGAP42A6NI28 874 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 ITM2AO43736 263 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 PDE5AO76074 875 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 HMBSP08397 361 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 TSHRP16473 764 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 TPSB2P20231 275 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 FGFR3P22607 806 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 CRABP2P29373 138 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 SERPINB6P35237 376 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 FDFT1P37268 417 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 GARSP41250 739 aaKnown RBP14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 PEX6Q13608 980 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 TPSAB1Q15661 275 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 C16orf46Q6P387 395 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 ARHGAP36Q6ZRI8 547 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 UNC5BQ8IZJ1 945 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 NDUFAF2Q8N183 169 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 CRIPAKQ8N1N5 446 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 HIPK4Q8NE63 616 aa14.91□□□□□ -0.02
PPP4R3A-201ENST00000554308 USP33Q8TEY7 942 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms