RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PRCCQ92733 491 aaPredicted RBP16.44■□□□□ 0.22
ACTN1-209ENST00000553659 SLC2A11Q9BYW1 496 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 OSBPL8Q9BZF1 889 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 TRIM7Q9C029 511 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 TSPYL1Q9H0U9 437 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 ASNSD1Q9NWL6 643 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 MARCH2Q9P0N8 246 aa16.44■□□□□ 0.22
ACTN1-209ENST00000553659 MTRF1LQ9UGC7 380 aaKnown RBP16.44■□□□□ 0.22
ACTN1-209ENST00000553659 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 ESYT3A0FGR9 886 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 GOLGA8KD6RF30 607 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 BCAT2O15382 392 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 RNF8O76064 485 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 FTH1P19P0C7X4 201 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 HOXB3P14651 431 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 PCK1P35558 622 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 PTGIRP43119 386 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 ACADSBP45954 432 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 YWHAGP61981 247 aaKnown RBP eCLIP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 RPL7AP62424 266 aaKnown RBP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 MRPS25P82663 173 aaKnown RBP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 COL9A2Q14055 689 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 CCNG2Q16589 344 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 GOLGA7BQ2TAP0 167 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 LRIG3Q6UXM1 1119 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 PHLDB2Q86SQ0 1253 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 GLRX5Q86SX6 157 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 PIGZQ86VD9 579 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 PROSER1Q86XN7 944 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 FAM217AQ8IXS0 508 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 ZCCHC9Q8N567 271 aaKnown RBP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 BBOF1Q8ND07 529 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 DDI1Q8WTU0 396 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 CPXM1Q96SM3 734 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 MIR1-1HGQ9H1L0 117 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 CLEC4EQ9ULY5 219 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 LHX6Q9UPM6 363 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 APOBEC2Q9Y235 224 aaKnown RBP16.43■□□□□ 0.22
ACTN1-209ENST00000553659 TMEM131Q92545 1883 aa16.43■□□□□ 0.22
ACTN1-209ENST00000553659 ZZEF1O43149 2961 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 SLC12A8A0AV02 714 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 CBFA2T3O75081 653 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 KRT1P04264 644 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 ERBB2P04626 1255 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 ZNF883P0CG24 379 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 ACADMP11310 421 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 PRKCHP24723 683 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 COPAP53621 1224 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 BCAT1P54687 386 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 SLC8A3P57103 927 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 TAS2R40P59535 323 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 CAV1Q03135 178 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 SCAPQ12770 1279 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 KLF1Q13351 362 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-209ENST00000553659 TMEM215Q68D42 235 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 PM20D1Q6GTS8 502 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 DRICH1Q6PGQ1 229 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-209ENST00000553659 IL27RAQ6UWB1 636 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 CEP128Q6ZU80 1094 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 ADAT2Q7Z6V5 191 aaKnown RBP16.42■□□□□ 0.22
ACTN1-209ENST00000553659 PNPLA1Q8N8W4 532 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 ANKRD52Q8NB46 1076 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 ATL2Q8NHH9 583 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 PLD4Q96BZ4 506 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 FMO2Q99518 471 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 SLC4A5Q9BY07 1137 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 CIPCQ9C0C6 399 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 PCOLCE2Q9UKZ9 415 aa16.42■□□□□ 0.22
ACTN1-209ENST00000553659 ASPMQ8IZT6 3477 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 CABIN1Q9Y6J0 2220 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 ZSCAN5CA6NGD5 496 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-209ENST00000553659 GOLGA8SH3BPF8 625 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 DAPK3O43293 454 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 CER1O95813 267 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 EPHX1P07099 455 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 GPD1P21695 349 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 ECHS1P30084 290 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 TKTL1P51854 596 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 ZNF143P52747 638 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-209ENST00000553659 BST2Q10589 180 aaKnown RBP16.41■□□□□ 0.22
ACTN1-209ENST00000553659 TRIP4Q15650 581 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-209ENST00000553659 PKDCCQ504Y2 493 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 ZFYVE27Q5T4F4 411 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 FAM102AQ5T9C2 384 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-209ENST00000553659 AADACL2Q6P093 401 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 SERPINA13PQ6UXR4 307 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 ARCQ7LC44 396 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 TMEM110Q86TL2 294 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 TTC13Q8NBP0 860 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 C1orf216Q8TAB5 229 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 SORCS1Q8WY21 1168 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 HSFY1Q96LI6 401 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 CNPY3Q9BT09 278 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 PCED1AQ9H1Q7 454 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 GAREM1Q9H706 876 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 IL21RQ9HBE5 538 aa16.41■□□□□ 0.22
ACTN1-209ENST00000553659 METTL5Q9NRN9 209 aaKnown RBP16.41■□□□□ 0.22
ACTN1-209ENST00000553659 KIAA1522Q9P206 1035 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-209ENST00000553659 EIF2B4Q9UI10 523 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms