RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 UBA2Q9UBT2 640 aaPredicted RBP17.9■□□□□ 0.46
PSEN1-206ENST00000553447 CLEC4EQ9ULY5 219 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 AAR2Q9Y312 384 aaKnown RBP17.9■□□□□ 0.46
PSEN1-206ENST00000553447 NFS1Q9Y697 457 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 MTCH2Q9Y6C9 303 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 WNT6Q9Y6F9 365 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 PDE4DIPQ5VU43 2346 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 DOCK8Q8NF50 2099 aa17.9■□□□□ 0.46
PSEN1-206ENST00000553447 TRANK1O15050 2925 aa17.89■□□□□ 0.46
PSEN1-206ENST00000553447 CBX4O00257 560 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 TBX10O75333 385 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 AVILO75366 819 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 ZMPSTE24O75844 475 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 ACSL3O95573 720 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 VIPR2P41587 438 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 GEMP55040 296 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 ARF5P84085 180 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 LMAN2Q12907 356 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 MTM1Q13496 603 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 SPARCL1Q14515 664 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 ZNF235Q14590 738 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 RFTN1Q14699 578 aaPredicted RBP17.89■□□□□ 0.45
PSEN1-206ENST00000553447 GRIN2CQ14957 1233 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 CTC1Q2NKJ3 1217 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 DNAJC21Q5F1R6 531 aaKnown RBP17.89■□□□□ 0.45
PSEN1-206ENST00000553447 ATAT1Q5SQI0 421 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 CES5AQ6NT32 575 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 BBS5Q8N3I7 341 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 PGBD5Q8N414 524 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 DCAF4L2Q8NA75 395 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 SPATA22Q8NHS9 363 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 PYROXD1Q8WU10 500 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 IMP4Q96G21 291 aaKnown RBP17.89■□□□□ 0.45
PSEN1-206ENST00000553447 S1PR5Q9H228 398 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 LRRC40Q9H9A6 602 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 TRPV4Q9HBA0 871 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 FAM53CQ9NYF3 392 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 MARK1Q9P0L2 795 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 KIAA1522Q9P206 1035 aaPredicted RBP17.89■□□□□ 0.45
PSEN1-206ENST00000553447 VPS28Q9UK41 221 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 CDH7Q9ULB5 785 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 TEX264Q9Y6I9 313 aa17.89■□□□□ 0.45
PSEN1-206ENST00000553447 TNRC18O15417 2968 aaPredicted RBP17.89■□□□□ 0.45
PSEN1-206ENST00000553447 SNAP91O60641 907 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 ABHD2P08910 425 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 POU3F3P20264 500 aaPredicted RBP17.88■□□□□ 0.45
PSEN1-206ENST00000553447 ELK3P41970 407 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 MAXP61244 160 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 DLX2Q07687 328 aaPredicted RBP17.88■□□□□ 0.45
PSEN1-206ENST00000553447 ITKQ08881 620 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 GPS2Q13227 327 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 CCDC38Q502W7 563 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 ADGRG2Q8IZP9 1017 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 AGGF1Q8N302 714 aaeCLIP17.88■□□□□ 0.45
PSEN1-206ENST00000553447 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.88■□□□□ 0.45
PSEN1-206ENST00000553447 FBXO36Q8NEA4 188 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 OR2W6PQ8NHA6 318 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 BPIFB1Q8TDL5 484 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 OSCP1Q8WVF1 389 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 ZBTB9Q96C00 473 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 LRRC39Q96DD0 335 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 LMLNQ96KR4 655 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 BBS2Q9BXC9 721 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 CASS4Q9NQ75 786 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 HAUS2Q9NVX0 235 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 DUS2Q9NX74 493 aaKnown RBP17.88■□□□□ 0.45
PSEN1-206ENST00000553447 CLDND1Q9NY35 253 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 OBP2AQ9NY56 170 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 UBP1Q9NZI7 540 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 SEPT3Q9UH03 358 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 CHMP2BQ9UQN3 213 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 ACTL7AQ9Y615 435 aa17.88■□□□□ 0.45
PSEN1-206ENST00000553447 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.88■□□□□ 0.45
PSEN1-206ENST00000553447 PRRC2BQ5JSZ5 2229 aaKnown RBP17.88■□□□□ 0.45
PSEN1-206ENST00000553447 NEDD8-MDP1E9PL57 170 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 MT-CYBP00156 380 aaPredicted RBP17.87■□□□□ 0.45
PSEN1-206ENST00000553447 SHBGP04278 402 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 TSHRP16473 764 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 CD70P32970 193 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 PLK1P53350 603 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 EIF3BP55884 814 aaKnown RBP17.87■□□□□ 0.45
PSEN1-206ENST00000553447 DSC2Q02487 901 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 ZNF844Q08AG5 666 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 NIPAL4Q0D2K0 466 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 OLIG2Q13516 323 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 SLC12A1Q13621 1099 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 ADGRE1Q14246 886 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 LY6G5CQ5SRR4 150 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 NAPEPLDQ6IQ20 393 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 PRPF39Q86UA1 669 aaKnown RBP17.87■□□□□ 0.45
PSEN1-206ENST00000553447 IGDCC3Q8IVU1 814 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 APCDD1Q8J025 514 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 ATP11CQ8NB49 1132 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 UHMK1Q8TAS1 419 aaKnown RBP17.87■□□□□ 0.45
PSEN1-206ENST00000553447 SIGLEC10Q96LC7 697 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 RIPOR3Q96MK2 946 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 CINPQ9BW66 212 aaPredicted RBP17.87■□□□□ 0.45
PSEN1-206ENST00000553447 POLR1EQ9GZS1 481 aaKnown RBP17.87■□□□□ 0.45
PSEN1-206ENST00000553447 LRRC4CQ9HCJ2 640 aa17.87■□□□□ 0.45
PSEN1-206ENST00000553447 VPS51Q9UID3 782 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms