RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 K7ERQ8 282 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 MCF2LO15068 1137 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 ARHGAP6O43182 974 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 MAP3K13O43283 966 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 SMAD6O43541 496 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 GFRA3O60609 400 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 PRAMEF11O60813 436 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 RHOBTB1O94844 696 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 EPN2O95208 641 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 CD160O95971 181 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 CD48P09326 243 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 COMTP21964 271 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 CD6P30203 668 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 OXTRP30559 389 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 PSMD8P48556 350 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 MRE11P49959 708 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 SFSWAPQ12872 951 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 INO80DQ53TQ3 878 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 LPCAT2Q7L5N7 544 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 RHOT1Q8IXI2 618 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 KCTD6Q8NC69 237 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 OR2A12Q8NGT7 310 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 TPCN2Q8NHX9 752 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 CELF6Q96J87 481 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 FAM129BQ96TA1 746 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 DESI2Q9BSY9 194 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 CALN1Q9BXU9 219 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 DDX56Q9NY93 547 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 SALL4Q9UJQ4 1053 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 FZD4Q9ULV1 537 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 INVSQ9Y283 1065 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 TRPM6Q9BX84 2022 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 PCDH15Q96QU1 1955 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 ADAMTS9Q9P2N4 1935 aa11.94□□□□□ -0.5
TRAFD1-209ENST00000552896 LRRD1A4D1F6 860 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 C1QTNF3-AMACRE9PGA6 284 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 MID1O15344 667 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 BUB1O43683 1085 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 NRDCO43847 1150 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 LRP3O75074 770 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 ZNF821O75541 412 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 TMCC1O94876 653 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 GSRP00390 522 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 PRNPP04156 253 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 KRT1P04264 644 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 C5AR1P21730 350 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 AMPD1P23109 780 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 IL4RP24394 825 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 RECQLP46063 649 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 PAPOLAP51003 745 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 RPL6Q02878 288 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 LPAL2Q16609 132 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 ATP13A4Q4VNC1 1196 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 ANKRD20A8PQ5CZ79 823 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 ZFYVE27Q5T4F4 411 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 FAM46CQ5VWP2 391 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 NCBP2-AS2Q69YL0 99 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 DAAM2Q86T65 1068 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 MMAAQ8IVH4 418 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 FRMD1Q8N878 549 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 RUBCNQ92622 972 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 TOE1Q96GM8 510 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 SLC39A8Q9C0K1 460 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 LACRTQ9GZZ8 138 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 PCED1AQ9H1Q7 454 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 TNKS2Q9H2K2 1166 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 GOLPH3Q9H4A6 298 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 SP110Q9HB58 689 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 ETNK2Q9NVF9 386 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 WSB2Q9NYS7 404 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 UBA2Q9UBT2 640 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 MFHAS1Q9Y4C4 1052 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 PCDHGA5Q9Y5G8 931 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 ACTL7AQ9Y615 435 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 ALG6Q9Y672 507 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
TRAFD1-209ENST00000552896 C3orf70A6NLC5 250 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 DFFAO00273 331 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 MFSD11O43934 449 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 NDUFS2O75306 463 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 CTSLP07711 333 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 RETP07949 1114 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 KDELR1P24390 212 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 DPP6P42658 865 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 CCNHP51946 323 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 IL10RBQ08334 325 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 KIF5AQ12840 1032 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 PAFAH1B3Q15102 231 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 IFI16Q16666 785 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 CARD16Q5EG05 197 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 DPY19L3Q6ZPD9 716 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 LRRC49Q8IUZ0 686 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 LRRC8AQ8IWT6 810 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 ATPAF2Q8N5M1 289 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 AADATQ8N5Z0 425 aa11.92□□□□□ -0.5
TRAFD1-209ENST00000552896 LRRC57Q8N9N7 239 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms