RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 PRKCHP24723 683 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 IL1R2P27930 398 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PLA2G5P39877 138 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 WASP42768 502 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 RWDD2BP57060 319 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 HNRNPDQ14103 355 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 DPYSL3Q14195 570 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PAFAH1B3Q15102 231 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PPP2R5EQ16537 467 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 ANKRD20A8PQ5CZ79 823 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 CFAP58Q5T655 872 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 AFMIDQ63HM1 303 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 C22orf39Q6P5X5 142 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PKN3Q6P5Z2 889 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 RAD9BQ6WBX8 426 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PRR23BQ6ZRT6 265 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 TMEM139Q8IV31 216 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 TTC13Q8NBP0 860 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 TRIM58Q8NG06 486 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 OR7D4Q8NG98 312 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 OR2AP1Q8NGE2 309 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 FAM174AQ8TBP5 190 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 FRS2Q8WU20 508 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 SORCS1Q8WY21 1168 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 TSC1Q92574 1164 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PTPRN2Q92932 1015 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 FAF2Q96CS3 445 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 MYEOVQ96EZ4 313 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 BTBD6Q96KE9 485 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 ZNF641Q96N77 438 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 TSGA13Q96PP4 275 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PPP1R2P1Q96PQ5 205 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PEBP4Q96S96 227 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 ACOX2Q99424 681 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 PABPC3Q9H361 631 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 LRRC19Q9H756 370 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 TMPRSS4Q9NRS4 437 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 KCTD5Q9NXV2 234 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 NCDNQ9UBB6 729 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 IL36AQ9UHA7 158 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 IPO11Q9UI26 975 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 SLCO3A1Q9UIG8 710 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 SMG5Q9UPR3 1016 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 MFHAS1Q9Y4C4 1052 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 SNX10Q9Y5X0 201 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 ADGRG1Q9Y653 693 aa10.46□□□□□ -0.73
TRAFD1-208ENST00000552890 TTC34A8MYJ7 566 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 WASH3PC4AMC7 463 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 DFFAO00273 331 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 DCLK1O15075 740 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 TJP3O95049 919 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 KRT1P04264 644 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 TGM2P21980 687 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CCNCP24863 283 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CHRNA3P32297 505 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 SLC8A1P32418 973 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CTNNA1P35221 906 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 TNNT3P45378 269 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 PAPOLAP51003 745 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 DNA2P51530 1060 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 TPMTP51580 245 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 COPAP53621 1224 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 RHOAP61586 193 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 AP1S1P61966 158 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 RPS14P62263 151 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 RPL6Q02878 288 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 ZNF235Q14590 738 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CCDC181Q5TID7 509 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 MARC1Q5VT66 337 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 TSSK4Q6SA08 328 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CYP4V2Q6ZWL3 525 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 MAIP1Q8WWC4 291 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 HMCESQ96FZ2 354 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 MYO19Q96H55 970 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 RNF157Q96PX1 679 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 PSMB7Q99436 277 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CINPQ9BW66 212 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 HDAC8Q9BY41 377 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 FRMD8P1Q9BZ68 369 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 ATP13A3Q9H7F0 1226 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 GPATCH2LQ9NWQ4 482 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 FBXL12Q9NXK8 326 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 PPM1HQ9ULR3 514 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 NEU3Q9UQ49 428 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 PCDHA3Q9Y5H8 950 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 RIF1Q5UIP0 2472 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 CKAP5Q14008 2032 aa10.45□□□□□ -0.74
TRAFD1-208ENST00000552890 HACD1B0YJ81 288 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 SNAP91O60641 907 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 MAGEC1O60732 1142 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 RNGTTO60942 597 aaKnown RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 STK10O94804 968 aaKnown RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 HLA-EP13747 358 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 XPAP23025 273 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 AMPD1P23109 780 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 ITGB7P26010 798 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 CTNNA2P26232 953 aa10.44□□□□□ -0.74
TRAFD1-208ENST00000552890 SERPINA4P29622 427 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms