RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SHROOM3Q8TF72 1996 aa8.92□□□□□ -0.98
TMEM116-217ENST00000552801 BAHCC1Q9P281 2608 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 A0A1W2PR77 199 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 GOLGA6L6A8MZA4 724 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 H3BM21 787 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 MCF2LO15068 1137 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 FFAR2O15552 330 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 LATO43561 262 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 THEGLP0DJG4 465 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 VAV1P15498 845 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 NOS2P35228 1153 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 DNA2P51530 1060 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 PLK1P53350 603 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 BPIFB4P59827 614 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 EXOC3L4Q17RC7 722 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 ACBD5Q5T8D3 534 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-217ENST00000552801 NEK5Q6P3R8 708 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 FOXR2Q6PJQ5 311 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 SARM1Q6SZW1 724 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 KDM7AQ6ZMT4 941 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 TMC6Q7Z403 805 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 ZDHHC17Q8IUH5 632 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 TRIM59Q8IWR1 403 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 ELOA2Q8IYF1 753 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-217ENST00000552801 RYBPQ8N488 228 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-217ENST00000552801 LMO3Q8TAP4 145 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 SPATA20Q8TB22 786 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 KIAA1524Q8TCG1 905 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 FGF11Q92914 225 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 FCRL3Q96P31 734 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-217ENST00000552801 SPON2Q9BUD6 331 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 EBF2Q9HAK2 575 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 APEX2Q9UBZ4 518 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 ANKRD11Q6UB99 2663 aaPredicted RBP8.91□□□□□ -0.98
TMEM116-217ENST00000552801 MYLKQ15746 1914 aa8.91□□□□□ -0.98
TMEM116-217ENST00000552801 A0A1W2PQU0 124 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 NEMP1O14524 444 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 WNT9AO14904 365 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 ATP9BO43861 1147 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 PAGE1O75459 146 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 DAB1O75553 588 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 F9P00740 461 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 PRLRP16471 622 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 HNRNPA2B1P22626 353 aaKnown RBP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 CHRNA3P32297 505 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 DRD3P35462 400 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 EIF2S3P41091 472 aaKnown RBP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 RPL34P49207 117 aaKnown RBP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 SULT1E1P49888 294 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 CLDN6P56747 220 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 SLC6A3Q01959 620 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 DEUP1Q05D60 604 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 SGCGQ13326 291 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 ZNF211Q13398 564 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 TAF5Q15542 800 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 RETSATQ6NUM9 610 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 FBXL19Q6PCT2 694 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 TRIM65Q6PJ69 517 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 FAM183BPQ6ZVS7 135 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 PTAR1Q7Z6K3 402 aaPredicted RBP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 FAM114A1Q8IWE2 563 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 LSMEM2Q8N112 164 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 SH2D3CQ8N5H7 860 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 C1orf131Q8NDD1 294 aaKnown RBP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 FAM174AQ8TBP5 190 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 KLK6Q92876 244 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 DEPDC7Q96QD5 511 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 DUSP23Q9BVJ7 150 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 TKTL2Q9H0I9 626 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 DNAJC28Q9NX36 388 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 IL36AQ9UHA7 158 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 PPM1HQ9ULR3 514 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 CNTN6Q9UQ52 1028 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 HS3ST4Q9Y661 456 aa8.9□□□□□ -0.98
TMEM116-217ENST00000552801 TDRD6O60522 2096 aaKnown RBP8.9□□□□□ -0.98
TMEM116-217ENST00000552801 CAPN8A6NHC0 703 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 A6NNZ2 444 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 SIGLEC6O43699 453 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 BRINP1O60477 761 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 SRGAP2O75044 1071 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 ENDOD1O94919 500 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 MT-CO3P00414 261 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 IGLV3-25P01717 112 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 CCNYL3P0C7X3 344 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 ACP1P24666 158 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 ITPKBP27987 946 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 OR1E1P30953 314 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 MARSP56192 900 aaKnown RBP8.89□□□□□ -0.99
TMEM116-217ENST00000552801 PCBP4P57723 403 aaKnown RBP8.89□□□□□ -0.99
TMEM116-217ENST00000552801 HNRNPKP61978 463 aaKnown RBP eCLIP8.89□□□□□ -0.99
TMEM116-217ENST00000552801 CXADRP78310 365 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 PITX1P78337 314 aaPredicted RBP8.89□□□□□ -0.99
TMEM116-217ENST00000552801 KCNMA1Q12791 1236 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 MORC3Q14149 939 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 RTP5Q14D33 572 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 SHBQ15464 509 aa8.89□□□□□ -0.99
TMEM116-217ENST00000552801 GLIPR1L2Q4G1C9 344 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms