RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 LMNAP02545 664 aaKnown RBP16.67■□□□□ 0.26
GCN1-209ENST00000551920 SLC20A2Q08357 652 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 PMS2CLQ68D20 193 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 DPY19L3Q6ZPD9 716 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 AADATQ8N5Z0 425 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 LZTR1Q8N653 840 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 PCDH20Q8N6Y1 951 aaKnown RBP16.67■□□□□ 0.26
GCN1-209ENST00000551920 ZNF419Q96HQ0 510 aaPredicted RBP16.67■□□□□ 0.26
GCN1-209ENST00000551920 PDLIM2Q96JY6 352 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 ZC3H10Q96K80 434 aaKnown RBP16.67■□□□□ 0.26
GCN1-209ENST00000551920 ITM2CQ9NQX7 267 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 CAPN6Q9Y6Q1 641 aa16.67■□□□□ 0.26
GCN1-209ENST00000551920 ZSCAN5CA6NGD5 496 aaPredicted RBP16.66■□□□□ 0.26
GCN1-209ENST00000551920 MAP3K6O95382 1288 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 PEX11BO96011 259 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 GEMIN4P57678 1058 aaKnown RBP16.66■□□□□ 0.26
GCN1-209ENST00000551920 GBE1Q04446 702 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 ZBTB16Q05516 673 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 KIF5AQ12840 1032 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 PAFAH1B3Q15102 231 aaKnown RBP16.66■□□□□ 0.26
GCN1-209ENST00000551920 TAZQ16635 292 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 POM121L1PQ3SYA9 428 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 ZFYVE27Q5T4F4 411 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 ATXN7L2Q5T6C5 722 aaPredicted RBP16.66■□□□□ 0.26
GCN1-209ENST00000551920 MFSD7Q6UXD7 560 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 FAM124AQ86V42 546 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 PLD5Q8N7P1 536 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 OR6K2Q8NGY2 324 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 GRIN3AQ8TCU5 1115 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 OR8D1Q8WZ84 308 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 ISG20Q96AZ6 181 aaKnown RBP16.66■□□□□ 0.26
GCN1-209ENST00000551920 RNF25Q96BH1 459 aaPredicted RBP16.66■□□□□ 0.26
GCN1-209ENST00000551920 FAM122AQ96E09 287 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 RNF157Q96PX1 679 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 LHX3Q9UBR4 397 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 WASF2Q9Y6W5 498 aa16.66■□□□□ 0.26
GCN1-209ENST00000551920 A0A1W2PP55 124 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 ZNF487B1APH4 448 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 PLK4O00444 970 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 ALOX15BO15296 676 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 IL1BP01584 269 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 DNTTP04053 509 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 ACADMP11310 421 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 CD6P30203 668 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 GKP32189 559 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 SLC8A1P32418 973 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 DRD3P35462 400 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 PTGER3P43115 390 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 CCNHP51946 323 aaPredicted RBP16.65■□□□□ 0.26
GCN1-209ENST00000551920 NAP1L1P55209 391 aaKnown RBP16.65■□□□□ 0.26
GCN1-209ENST00000551920 CYTH1Q15438 398 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 MAP7D3Q8IWC1 876 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 KATNAL2Q8IYT4 538 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 TOE1Q96GM8 510 aaKnown RBP16.65■□□□□ 0.26
GCN1-209ENST00000551920 EXOC2Q96KP1 924 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 KCNF1Q9H3M0 494 aa16.65■□□□□ 0.26
GCN1-209ENST00000551920 DDX56Q9NY93 547 aaKnown RBP16.65■□□□□ 0.26
GCN1-209ENST00000551920 WSB2Q9NYS7 404 aaPredicted RBP16.65■□□□□ 0.26
GCN1-209ENST00000551920 UBA2Q9UBT2 640 aaPredicted RBP16.65■□□□□ 0.26
GCN1-209ENST00000551920 IPO11Q9UI26 975 aaKnown RBP16.65■□□□□ 0.26
GCN1-209ENST00000551920 ZNF292O60281 2723 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 MUSKO15146 869 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 MAFKO60675 156 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 RNASEH1O60930 286 aaKnown RBP16.64■□□□□ 0.25
GCN1-209ENST00000551920 PALMO75781 387 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 ADH1BP00325 375 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 GSRP00390 522 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 CHRNA3P32297 505 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 ACSL1P33121 698 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 CTNNA1P35221 906 aaKnown RBP16.64■□□□□ 0.25
GCN1-209ENST00000551920 SERPINB6P35237 376 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 CDKN2BP42772 138 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 RGRP47804 291 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 DNA2P51530 1060 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
GCN1-209ENST00000551920 GALNT2Q10471 571 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 SLC10A2Q12908 348 aaPredicted RBP16.64■□□□□ 0.25
GCN1-209ENST00000551920 LLGL1Q15334 1064 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 TTC31Q49AM3 519 aaPredicted RBP16.64■□□□□ 0.25
GCN1-209ENST00000551920 INO80DQ53TQ3 878 aaPredicted RBP16.64■□□□□ 0.25
GCN1-209ENST00000551920 CARD16Q5EG05 197 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 SLC9A4Q6AI14 798 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 LAIR1Q6GTX8 287 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 ARMCX6Q7L4S7 300 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 NT5DC3Q86UY8 548 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 SLC41A1Q8IVJ1 513 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 TMEFF1Q8IYR6 380 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 DEFB119Q8N690 84 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 PIP4K2CQ8TBX8 421 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 LRRN4Q8WUT4 740 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 ALG3Q92685 438 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 FAM131CQ96AQ9 280 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 CALR3Q96L12 384 aaKnown RBP16.64■□□□□ 0.25
GCN1-209ENST00000551920 SP110Q9HB58 689 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 FBXL12Q9NXK8 326 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 DTLQ9NZJ0 730 aa16.64■□□□□ 0.25
GCN1-209ENST00000551920 PIEZO1Q92508 2521 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms