RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 RHOQP17081 205 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 CHRNA3P32297 505 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 PRKCIP41743 596 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 CLCN6P51797 869 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 ZNF143P52747 638 aaPredicted RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 RACK1P63244 317 aaKnown RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 KRT83P78385 493 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 NR1I3Q14994 352 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 KLHL40Q2TBA0 621 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 DNAJC24Q6P3W2 148 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 DPY19L3Q6ZPD9 716 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 LUZP1Q86V48 1076 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 GATA6Q92908 595 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 ARHGEF2Q92974 986 aaKnown RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 PPP1R9BQ96SB3 815 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 NAT10Q9H0A0 1025 aaKnown RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 SLC32A1Q9H598 525 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 CAAP1Q9H8G2 361 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 ATP13A1Q9HD20 1204 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 SEPT11Q9NVA2 429 aaKnown RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 TOR4AQ9NXH8 423 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 AIPL1Q9NZN9 384 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 DNAI1Q9UI46 699 aa13.31□□□□□ -0.28
NPAS3-209ENST00000551008 FCF1Q9Y324 198 aaKnown RBP13.31□□□□□ -0.28
NPAS3-209ENST00000551008 FREM2Q5SZK8 3169 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 SMTNL1A8MU46 457 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 SLC7A4O43246 635 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 MAPKAPK2P49137 400 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 PRAMEF14Q5SWL7 426 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 PLEKHA7Q6IQ23 1121 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 IL27RAQ6UWB1 636 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 RAB44Q7Z6P3 723 aaPredicted RBP13.3□□□□□ -0.28
NPAS3-209ENST00000551008 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 GLRX5Q86SX6 157 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 SLCO6A1Q86UG4 719 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 TRIM69Q86WT6 500 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 SPATS2Q86XZ4 545 aaKnown RBP13.3□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D31Q96DN5 1066 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 PEBP4Q96S96 227 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 CNPY3Q9BT09 278 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 SPON2Q9BUD6 331 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 HAUS4Q9H6D7 363 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 GPATCH2LQ9NWQ4 482 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 KLK13Q9UKR3 277 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 FZD10Q9ULW2 581 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 ZFR2Q9UPR6 939 aaKnown RBP13.3□□□□□ -0.28
NPAS3-209ENST00000551008 CA5BQ9Y2D0 317 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 PCDHGB2Q9Y5G2 931 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 CFAP47Q6ZTR5 3102 aa13.3□□□□□ -0.28
NPAS3-209ENST00000551008 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 C1QTNF9BB2RNN3 333 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 C1QTNF3-AMACRE9PGA6 284 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 SPINT1O43278 529 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 DKK1O94907 266 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 C1QTNF9P0C862 333 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 MAT2AP31153 395 aaKnown RBP13.29□□□□□ -0.28
NPAS3-209ENST00000551008 L1CAMP32004 1257 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 IL9RQ01113 521 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
NPAS3-209ENST00000551008 MAMLD1Q13495 774 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 TEAD4Q15561 434 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 TRIP6Q15654 476 aaKnown RBP13.29□□□□□ -0.28
NPAS3-209ENST00000551008 ASIC2Q16515 512 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 CA9Q16790 459 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 ARSIQ5FYB1 569 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 FAM46CQ5VWP2 391 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 HGSNATQ68CP4 663 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 RWDD4Q6NW29 188 aaKnown RBP13.29□□□□□ -0.28
NPAS3-209ENST00000551008 LEKR1Q6ZMV7 388 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 KANSL1Q7Z3B3 1105 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 SLFN11Q7Z7L1 901 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 RTL3Q8N8U3 475 aaKnown RBP13.29□□□□□ -0.28
NPAS3-209ENST00000551008 TMIEQ8NEW7 156 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 GRIN3AQ8TCU5 1115 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 SERAC1Q96JX3 654 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 CEP44Q9C0F1 390 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 KDM4CQ9H3R0 1056 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 MYLKQ15746 1914 aa13.29□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3DA0A087WVF3 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3IA0A087WXS9 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3EA0A087X179 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3KA0A087X1G2 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 A0A1B0GTQ1 180 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3FA6NER0 549 aaPredicted RBP13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3LB9A6J9 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 KPNA3O00505 521 aaPredicted RBP13.28□□□□□ -0.28
NPAS3-209ENST00000551008 PCDHGA12O60330 932 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 LEFTY1O75610 366 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TBC1D3HP0C7X1 549 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 FTH1P19P0C7X4 201 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 SKILP12757 684 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 CD38P28907 300 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 GKP32189 559 aa13.28□□□□□ -0.28
NPAS3-209ENST00000551008 CCNHP51946 323 aaPredicted RBP13.28□□□□□ -0.28
NPAS3-209ENST00000551008 NXPH1P58417 271 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms