RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 IRF2BP1Q8IU81 584 aa13.15□□□□□ -0.3
PTCH1-221ENST00000550914 FAM71AQ8IYT1 594 aa13.15□□□□□ -0.3
PTCH1-221ENST00000550914 ARRDC3Q96B67 414 aa13.15□□□□□ -0.3
PTCH1-221ENST00000550914 USP29Q9HBJ7 922 aa13.15□□□□□ -0.3
PTCH1-221ENST00000550914 SIX2Q9NPC8 291 aa13.15□□□□□ -0.3
PTCH1-221ENST00000550914 KIAA1468Q9P260 1216 aa13.15□□□□□ -0.3
PTCH1-221ENST00000550914 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
PTCH1-221ENST00000550914 TENM4Q6N022 2769 aa13.15□□□□□ -0.31
PTCH1-221ENST00000550914 RP1P56715 2156 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 NEMP2A6NFY4 417 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 I6L893 689 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-221ENST00000550914 FOXN3O00409 490 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-221ENST00000550914 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
PTCH1-221ENST00000550914 ATXN7O15265 892 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-221ENST00000550914 SMAD6O43541 496 aaKnown RBP13.14□□□□□ -0.31
PTCH1-221ENST00000550914 PIAS2O75928 621 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 MT-CO3P00414 261 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 GP1BAP07359 652 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 ALPPL2P10696 532 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 PRLRP16471 622 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 RRM1P23921 792 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 CDH5P33151 784 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-221ENST00000550914 RECQLP46063 649 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-221ENST00000550914 DAB2P98082 770 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 APBA1Q02410 837 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 TBC1D25Q3MII6 688 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 RETSATQ6NUM9 610 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 C22orf39Q6P5X5 142 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 SLC47A2Q86VL8 602 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 FAM181AQ8N9Y4 354 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 HAPLN3Q96S86 360 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 CEP44Q9C0F1 390 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 ANLNQ9NQW6 1124 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 GPR27Q9NS67 375 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 EVA1BQ9NVM1 165 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 NLGN3Q9NZ94 848 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 IL36AQ9UHA7 158 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 DNAJC12Q9UKB3 198 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 HS3ST3A1Q9Y663 406 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 PIEZO2Q9H5I5 2752 aa13.14□□□□□ -0.31
PTCH1-221ENST00000550914 A0A0D9SEW6 157 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 TEX51A0A1B0GUA7 166 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 A6NNZ2 444 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 K7ERQ8 282 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 AP1G1O43747 822 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 PCDH8O95206 1070 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 GIMD1P0DJR0 217 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 ITGB7P26010 798 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 OR1E1P30953 314 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 SULT1E1P49888 294 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 DUSP3P51452 185 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 RPS21P63220 83 aaKnown RBP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 C19orf57Q0VDD7 668 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 CDCP2Q5VXM1 449 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 KIAA1161Q6NSJ0 714 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 GCNT7Q6ZNI0 430 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 ARCQ7LC44 396 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 CREBRFQ8IUR6 639 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 LSMEM2Q8N112 164 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 PCDH20Q8N6Y1 951 aaKnown RBP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 CHST14Q8NCH0 376 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 OR13H1Q8NG92 308 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 C18orf8Q96DM3 657 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 DUSP23Q9BVJ7 150 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 CALN1Q9BXU9 219 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 RETREG1Q9H6L5 497 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 UCKL1Q9NWZ5 548 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 ZNF212Q9UDV6 495 aa13.13□□□□□ -0.31
PTCH1-221ENST00000550914 AJAP1Q9UKB5 411 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 ZFR2Q9UPR6 939 aaKnown RBP13.13□□□□□ -0.31
PTCH1-221ENST00000550914 SCAMP1O15126 338 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 OPA1O60313 960 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 ZNF821O75541 412 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 LEFTY1O75610 366 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 ZMPSTE24O75844 475 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 LSM8O95777 96 aaKnown RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 TFE3P19532 575 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 SERPINH1P50454 418 aaKnown RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 NEK3P51956 506 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 RNASE9P60153 205 aaKnown RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 TLE3Q04726 772 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 FAM102AQ5T9C2 384 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 LINGO4Q6UY18 593 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 KYAT3Q6YP21 454 aaKnown RBP13.12□□□□□ -0.31
PTCH1-221ENST00000550914 DPY19L3Q6ZPD9 716 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 BNIPLQ7Z465 357 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 TFAP2DQ7Z6R9 452 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 ERICH1Q86X53 443 aa13.12□□□□□ -0.31
PTCH1-221ENST00000550914 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms