RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
CDK4-207ENST00000550419 TMIEQ8NEW7 156 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 UBE2Q2Q8WVN8 375 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 RAPGEF5Q92565 580 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 ANP32BQ92688 251 aaKnown RBP17.8■□□□□ 0.44
CDK4-207ENST00000550419 FAM131CQ96AQ9 280 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 ZNF599Q96NL3 588 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 RNF157Q96PX1 679 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 PCED1AQ9H1Q7 454 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 WSB2Q9NYS7 404 aaPredicted RBP17.8■□□□□ 0.44
CDK4-207ENST00000550419 FZD4Q9ULV1 537 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 CYP8B1Q9UNU6 501 aa17.8■□□□□ 0.44
CDK4-207ENST00000550419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDK4-207ENST00000550419 ZFHX2Q9C0A1 2572 aaPredicted RBP17.8■□□□□ 0.44
CDK4-207ENST00000550419 LRRD1A4D1F6 860 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 MAP3K13O43283 966 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 GSRP00390 522 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 BCKDHBP21953 392 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
CDK4-207ENST00000550419 SLC8A1P32418 973 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 CCZ1BP86790 482 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 CCZ1P86791 482 aaPredicted RBP17.79■□□□□ 0.44
CDK4-207ENST00000550419 RFTN1Q14699 578 aaPredicted RBP17.79■□□□□ 0.44
CDK4-207ENST00000550419 TAZQ16635 292 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 CARD16Q5EG05 197 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 ZFYVE27Q5T4F4 411 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 TMCO4Q5TGY1 634 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 LPCAT2Q7L5N7 544 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 MMAAQ8IVH4 418 aaKnown RBP17.79■□□□□ 0.44
CDK4-207ENST00000550419 KATNAL2Q8IYT4 538 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 LRRC57Q8N9N7 239 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 KIAA1524Q8TCG1 905 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 LRIG1Q96JA1 1093 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 TSGA10Q9BZW7 698 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 KLHL11Q9NVR0 708 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 INVSQ9Y283 1065 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 FCF1Q9Y324 198 aaKnown RBP17.79■□□□□ 0.44
CDK4-207ENST00000550419 HYOU1Q9Y4L1 999 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 PIEZO1Q92508 2521 aa17.79■□□□□ 0.44
CDK4-207ENST00000550419 NYNRINQ9P2P1 1898 aaKnown RBP17.78■□□□□ 0.44
CDK4-207ENST00000550419 C1QTNF3-AMACRE9PGA6 284 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 J3KR12 359 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 DFFAO00273 331 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 TMCC1O94876 653 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 IL1BP01584 269 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 PRNPP04156 253 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 RETP07949 1114 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 CHRNA3P32297 505 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 CTNNA1P35221 906 aaKnown RBP17.78■□□□□ 0.44
CDK4-207ENST00000550419 NAP1L1P55209 391 aaKnown RBP17.78■□□□□ 0.44
CDK4-207ENST00000550419 SNRPD1P62314 119 aaKnown RBP17.78■□□□□ 0.44
CDK4-207ENST00000550419 NCBP2-AS2Q69YL0 99 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 DPY19L3Q6ZPD9 716 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 ASCL5Q7RTU5 278 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 SYCE1Q8N0S2 351 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 PQLC3Q8N755 202 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 FRMD1Q8N878 549 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 CADM4Q8NFZ8 388 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 OR2AP1Q8NGE2 309 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 RUBCNQ92622 972 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 TOE1Q96GM8 510 aaKnown RBP17.78■□□□□ 0.44
CDK4-207ENST00000550419 PDLIM2Q96JY6 352 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 TNKS2Q9H2K2 1166 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 GOLPH3Q9H4A6 298 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 SGK2Q9HBY8 427 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 CD93Q9NPY3 652 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 UBA2Q9UBT2 640 aaPredicted RBP17.78■□□□□ 0.44
CDK4-207ENST00000550419 IPO11Q9UI26 975 aaKnown RBP17.78■□□□□ 0.44
CDK4-207ENST00000550419 NCKAP1Q9Y2A7 1128 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 MFHAS1Q9Y4C4 1052 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 PCDHGA5Q9Y5G8 931 aa17.78■□□□□ 0.44
CDK4-207ENST00000550419 GPR179Q6PRD1 2367 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 CCDC66A2RUB6 948 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 MID1O15344 667 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 KRT86O43790 486 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 MAFKO60675 156 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 LRP3O75074 770 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 ZRANB2O95218 330 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDK4-207ENST00000550419 KRT1P04264 644 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 CCDC175P0C221 793 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 ZFXP17010 805 aaPredicted RBP17.77■□□□□ 0.44
CDK4-207ENST00000550419 RPL6Q02878 288 aaKnown RBP17.77■□□□□ 0.44
CDK4-207ENST00000550419 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 SLC9A4Q6AI14 798 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 ALYREFQ86V81 257 aaKnown RBP17.77■□□□□ 0.44
CDK4-207ENST00000550419 CACUL1Q86Y37 369 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 EXD1Q8NHP7 514 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 PIP4K2CQ8TBX8 421 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 FATE1Q969F0 183 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 ZNF419Q96HQ0 510 aaPredicted RBP17.77■□□□□ 0.44
CDK4-207ENST00000550419 GDAP1L1Q96MZ0 367 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 HEPHQ9BQS7 1158 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 SP110Q9HB58 689 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 FBXL12Q9NXK8 326 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 IL36AQ9UHA7 158 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 SARDHQ9UL12 918 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 PCDHA3Q9Y5H8 950 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 ACTL7AQ9Y615 435 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 WASF2Q9Y6W5 498 aa17.77■□□□□ 0.44
CDK4-207ENST00000550419 OTOGLQ3ZCN5 2332 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms