RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 HORMAD1Q86X24 394 aa12.88□□□□□ -0.35
LETMD1-222ENST00000550274 GRIN3AQ8TCU5 1115 aa12.88□□□□□ -0.35
LETMD1-222ENST00000550274 TMPRSS4Q9NRS4 437 aa12.88□□□□□ -0.35
LETMD1-222ENST00000550274 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
LETMD1-222ENST00000550274 LRP4O75096 1905 aa12.88□□□□□ -0.35
LETMD1-222ENST00000550274 LY6G6EA0A0G2JKS1 128 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 OPA1O60313 960 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 MPOP05164 745 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
LETMD1-222ENST00000550274 CKMT1AP12532 417 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 AKT2P31751 481 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 CXADRP78310 365 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 KRT83P78385 493 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 SLC6A3Q01959 620 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 MTA1Q13330 715 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 TMEM259Q4ZIN3 620 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 ZNF542PQ5EBM4 170 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 ARTNQ5T4W7 220 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 CDCP2Q5VXM1 449 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 ERN2Q76MJ5 926 aaKnown RBP12.87□□□□□ -0.35
LETMD1-222ENST00000550274 TFAP2DQ7Z6R9 452 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 ABI3BPQ7Z7G0 1075 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 TMIEQ8NEW7 156 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 NAF1Q96HR8 494 aaKnown RBP12.87□□□□□ -0.35
LETMD1-222ENST00000550274 APOLD1Q96LR9 279 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 NPY6RQ99463 290 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 LGMNQ99538 433 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 C2orf49Q9BVC5 232 aaPredicted RBP12.87□□□□□ -0.35
LETMD1-222ENST00000550274 TKTL2Q9H0I9 626 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 TNKS2Q9H2K2 1166 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 PLCB1Q9NQ66 1216 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 ARHGEF38Q9NXL2 777 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 MPP6Q9NZW5 540 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 U3KQA8 63 aa12.87□□□□□ -0.35
LETMD1-222ENST00000550274 ANKRD36A6QL64 1941 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 TEX51A0A1B0GUA7 166 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 ZNF821O75541 412 aaPredicted RBP12.86□□□□□ -0.35
LETMD1-222ENST00000550274 NEBLO76041 1014 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 ENDOD1O94919 500 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 PCDH8O95206 1070 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 PRNPP04156 253 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 PON1P27169 355 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 CXCR3P49682 368 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 SULT1E1P49888 294 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 FGL2Q14314 439 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 ARSIQ5FYB1 569 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 GBP6Q6ZN66 633 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 DPY19L3Q6ZPD9 716 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 SLC47A2Q86VL8 602 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 ZNF843Q8N446 348 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 DCAF4L2Q8NA75 395 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 LSM14AQ8ND56 463 aaKnown RBP12.86□□□□□ -0.35
LETMD1-222ENST00000550274 ZNF397Q8NF99 534 aaPredicted RBP12.86□□□□□ -0.35
LETMD1-222ENST00000550274 OR7D4Q8NG98 312 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 BMFQ96LC9 184 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 FAM81BQ96LP2 452 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 CCDC114Q96M63 670 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 HDAC8Q9BY41 377 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 SIX2Q9NPC8 291 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 DYRK4Q9NR20 520 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 GPR27Q9NS67 375 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 IL36AQ9UHA7 158 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 WASF2Q9Y6W5 498 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 SCN8AQ9UQD0 1980 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 BOD1L1Q8NFC6 3051 aa12.86□□□□□ -0.35
LETMD1-222ENST00000550274 FAM170AA1A519 330 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 POM121BA6NF01 834 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 DRGXA6NNA5 263 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 A6NNZ2 444 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 K7ESM1 405 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 RAD51BO15315 384 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 CSO75390 466 aaKnown RBP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 LEFTY1O75610 366 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 PLA2G2AP14555 144 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 CLCN1P35523 988 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 CLCN6P51797 869 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 PCBP4P57723 403 aaKnown RBP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 GABREP78334 506 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 PTK2Q05397 1052 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 EXOC3L4Q17RC7 722 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 HS1BP3Q53T59 392 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 Q6ZSR6 202 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 PTAR1Q7Z6K3 402 aaPredicted RBP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 SETD3Q86TU7 594 aaPredicted RBP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 ZNF248Q8NDW4 579 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 NT5C3BQ969T7 300 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 TBCBQ99426 244 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 SYNCQ9H7C4 482 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 DNAJC28Q9NX36 388 aa12.85□□□□□ -0.35
LETMD1-222ENST00000550274 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.35
LETMD1-222ENST00000550274 NLGN3Q9NZ94 848 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms