RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 KIAA1524Q8TCG1 905 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 FAF2Q96CS3 445 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 TNKS2Q9H2K2 1166 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 TRIM10Q9UDY6 481 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 MBD1Q9UIS9 605 aaPredicted RBP19.73■□□□□ 0.75
DDX54-207ENST00000550016 SCML1Q9UN30 329 aa19.73■□□□□ 0.75
DDX54-207ENST00000550016 FCF1Q9Y324 198 aaKnown RBP19.73■□□□□ 0.75
DDX54-207ENST00000550016 TNRC6BQ9UPQ9 1833 aaKnown RBP19.73■□□□□ 0.75
DDX54-207ENST00000550016 ANKRD36A6QL64 1941 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 A0A0U1RQJ8 604 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 C3orf70A6NLC5 250 aaPredicted RBP19.72■□□□□ 0.75
DDX54-207ENST00000550016 J3KR12 359 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 ZNF821O75541 412 aaPredicted RBP19.72■□□□□ 0.75
DDX54-207ENST00000550016 RHOBTB1O94844 696 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 IGLV3-19P01714 112 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 KRT1P04264 644 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 BCKDHBP21953 392 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 SLC8A1P32418 973 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 SFSWAPQ12872 951 aaKnown RBP19.72■□□□□ 0.75
DDX54-207ENST00000550016 GSE1Q14687 1217 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 PAFAH1B3Q15102 231 aaKnown RBP19.72■□□□□ 0.75
DDX54-207ENST00000550016 ELF2Q15723 593 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 PLK5Q496M5 336 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 PLPP6Q8IY26 295 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 NETO2Q8NC67 525 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 RNF157Q96PX1 679 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 DUSP15Q9H1R2 295 aaPredicted RBP19.72■□□□□ 0.75
DDX54-207ENST00000550016 PABPC3Q9H361 631 aaKnown RBP19.72■□□□□ 0.75
DDX54-207ENST00000550016 PDFQ9HBH1 243 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 CD93Q9NPY3 652 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 UBA2Q9UBT2 640 aaPredicted RBP19.72■□□□□ 0.75
DDX54-207ENST00000550016 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDX54-207ENST00000550016 GON4LQ3T8J9 2241 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 VPS13AQ96RL7 3174 aa19.72■□□□□ 0.75
DDX54-207ENST00000550016 MACROD2A1Z1Q3 448 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 MID1O15344 667 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 TMCC1O94876 653 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 ADH1BP00325 375 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 IL1BP01584 269 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 C5AR1P21730 350 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 DNA2P51530 1060 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 IL10RBQ08334 325 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 LPAL2Q16609 132 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 TTC31Q49AM3 519 aaPredicted RBP19.71■□□□□ 0.75
DDX54-207ENST00000550016 CARD16Q5EG05 197 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 LAIR1Q6GTX8 287 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 TP53INP2Q8IXH6 220 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 RNF10Q8N5U6 811 aaKnown RBP19.71■□□□□ 0.75
DDX54-207ENST00000550016 LRRC57Q8N9N7 239 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 MAK16Q9BXY0 300 aaKnown RBP19.71■□□□□ 0.75
DDX54-207ENST00000550016 TSGA10Q9BZW7 698 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 SP110Q9HB58 689 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 IPO11Q9UI26 975 aaKnown RBP19.71■□□□□ 0.75
DDX54-207ENST00000550016 PPM1HQ9ULR3 514 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 NCKAP1Q9Y2A7 1128 aa19.71■□□□□ 0.75
DDX54-207ENST00000550016 GRID2IPA4D2P6 1211 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 PRR23AA6NEV1 266 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 KRT86O43790 486 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 CD6P30203 668 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 CHRNA3P32297 505 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 PSMD8P48556 350 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 SNRPD1P62314 119 aaKnown RBP19.7■□□□□ 0.74
DDX54-207ENST00000550016 FAM46CQ5VWP2 391 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 NCBP2-AS2Q69YL0 99 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 DPY19L3Q6ZPD9 716 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 ARHGAP36Q6ZRI8 547 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 USP30Q70CQ3 517 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 LPCAT2Q7L5N7 544 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 ASCL5Q7RTU5 278 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 LRRC49Q8IUZ0 686 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 KATNAL2Q8IYT4 538 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 PQLC3Q8N755 202 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 CHST14Q8NCH0 376 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 TMIEQ8NEW7 156 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 PIP4K2CQ8TBX8 421 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 GANCQ8TET4 914 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 RNF25Q96BH1 459 aaPredicted RBP19.7■□□□□ 0.74
DDX54-207ENST00000550016 TOE1Q96GM8 510 aaKnown RBP19.7■□□□□ 0.74
DDX54-207ENST00000550016 LOXL4Q96JB6 756 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 FBXL12Q9NXK8 326 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 WSB2Q9NYS7 404 aaPredicted RBP19.7■□□□□ 0.74
DDX54-207ENST00000550016 SARDHQ9UL12 918 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 PI4KAP42356 2102 aa19.7■□□□□ 0.74
DDX54-207ENST00000550016 ZFHX2Q9C0A1 2572 aaPredicted RBP19.7■□□□□ 0.74
DDX54-207ENST00000550016 C1QTNF3-AMACRE9PGA6 284 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 NDUFS2O75306 463 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 ZRANB2O95218 330 aaKnown RBP eCLIP19.69■□□□□ 0.74
DDX54-207ENST00000550016 GSRP00390 522 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 PRNPP04156 253 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 CCDC175P0C221 793 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 RPL6Q02878 288 aaKnown RBP19.69■□□□□ 0.74
DDX54-207ENST00000550016 CYTH1Q15438 398 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 SPDYCQ5MJ68 293 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 PMS2CLQ68D20 193 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 MFSD7Q6UXD7 560 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 FAM124AQ86V42 546 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 RCOR2Q8IZ40 523 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 SYCE1Q8N0S2 351 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 OR2AP1Q8NGE2 309 aa19.69■□□□□ 0.74
DDX54-207ENST00000550016 OMDQ99983 421 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms