RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 LINGO4Q6UY18 593 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 SLC36A4Q6YBV0 504 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 Q6ZVU0 165 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 DAAM2Q86T65 1068 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 KIAA1328Q86T90 577 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 NT5DC3Q86UY8 548 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 KBTBD6Q86V97 674 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 PLD5Q8N7P1 536 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 ATP11CQ8NB49 1132 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 TMIEQ8NEW7 156 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 OR8D1Q8WZ84 308 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 LRIG1Q96JA1 1093 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 SPACA7Q96KW9 195 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 CCDC114Q96M63 670 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 TSGA13Q96PP4 275 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 PHOX2BQ99453 314 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 SLC6A17Q9H1V8 727 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 GOLPH3Q9H4A6 298 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 WSB2Q9NYS7 404 aaPredicted RBP12.13□□□□□ -0.47
PFDN5-208ENST00000549995 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.47
PFDN5-208ENST00000549995 LHX3Q9UBR4 397 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 PPM1HQ9ULR3 514 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 FZD4Q9ULV1 537 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 SMG5Q9UPR3 1016 aaKnown RBP12.13□□□□□ -0.47
PFDN5-208ENST00000549995 EFR3BQ9Y2G0 817 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 WASF2Q9Y6W5 498 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 WDR87Q6ZQQ6 2873 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 GPR179Q6PRD1 2367 aa12.13□□□□□ -0.47
PFDN5-208ENST00000549995 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 FRYLO94915 3013 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 ZFHX2Q9C0A1 2572 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 J3KR12 359 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 ZBTB24O43167 697 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 SLC7A4O43246 635 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 BUB1O43683 1085 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 KRT86O43790 486 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 MAFKO60675 156 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 RNASEH1O60930 286 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 TMCC1O94876 653 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 EPN2O95208 641 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 KRT1P04264 644 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CCDC175P0C221 793 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 BCKDHBP21953 392 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 DRD3P35462 400 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 SSR1P43307 286 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CSNK1DP48730 415 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 COPS2P61201 443 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 SFSWAPQ12872 951 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 SRSF5Q13243 272 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 SIM2Q14190 667 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 GSE1Q14687 1217 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CYTH1Q15438 398 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 TTC31Q49AM3 519 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CARD16Q5EG05 197 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 MFSD7Q6UXD7 560 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 DSG4Q86SJ6 1040 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 TP53INP2Q8IXH6 220 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 ABCA7Q8IZY2 2146 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 STK40Q8N2I9 435 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 TEX26Q8N6G2 289 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 OR2AP1Q8NGE2 309 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 MAML1Q92585 1016 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 NKD2Q969F2 451 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 HDAC11Q96DB2 347 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CELF6Q96J87 481 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 OLFM3Q96PB7 478 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CALN1Q9BXU9 219 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CD93Q9NPY3 652 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 KLHL11Q9NVR0 708 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 UBA2Q9UBT2 640 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 TRIM10Q9UDY6 481 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 IPO11Q9UI26 975 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
PFDN5-208ENST00000549995 HYOU1Q9Y4L1 999 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 ACTL7AQ9Y615 435 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 CAPN6Q9Y6Q1 641 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 PCDH15Q96QU1 1955 aa12.12□□□□□ -0.47
PFDN5-208ENST00000549995 PLXNA2O75051 1894 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 hCG_1818297A0A087WSY0 165 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 MIF4GDA9UHW6 222 aaKnown RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 NRDCO43847 1150 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 LRP3O75074 770 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 DNTTP04053 509 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 PRNPP04156 253 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 CD6P30203 668 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 CHRNA3P32297 505 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 GJC1P36383 396 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 GARSP41250 739 aaKnown RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 MARCKSL1P49006 195 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 NUMBP49757 651 aa12.11□□□□□ -0.47
PFDN5-208ENST00000549995 CCNHP51946 323 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-208ENST00000549995 SNRPD1P62314 119 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms