RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 MAST4O15021 2626 aa6.86□□□□□ -1.31
TMEM116-208ENST00000549537 PCNX2A6NKB5 2137 aa6.86□□□□□ -1.31
TMEM116-208ENST00000549537 PI4KAP42356 2102 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 GIPC1O14908 333 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 HYAL3O43820 417 aaPredicted RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 GJB3O75712 270 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 GRAP2O75791 330 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 KCNK5O95279 499 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 LSM8O95777 96 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 PDGFAP04085 211 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ATP5BP06576 529 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ZNF18P17022 549 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CHRNB2P17787 502 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 POLR2EP19388 210 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 PMLP29590 882 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 OXTRP30559 389 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CCR1P32246 355 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 KRT9P35527 623 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 MATKP42679 507 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CXCR3P49682 368 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 IRAK1P51617 712 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 BPIFB4P59827 614 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 RPS14P62263 151 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 NOMO3P69849 1222 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CDK17Q00537 523 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 SERINC3Q13530 473 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 RAPGEF1Q13905 1077 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 NCAPHQ15003 741 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ST3GAL2Q16842 350 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 C5orf22Q49AR2 442 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 N4BP2L1Q5TBK1 243 aaPredicted RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 OR6B2Q6IFH4 312 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CXorf57Q6NSI4 855 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 TRNP1Q6NT89 227 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 RABEPKQ7Z6M1 372 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CHSY1Q86X52 802 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 XYLT1Q86Y38 959 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ZDHHC17Q8IUH5 632 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ZNF683Q8IZ20 524 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 APCDD1Q8J025 514 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 LGI2Q8N0V4 545 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CNPY4Q8N129 248 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CARNMT1Q8N4J0 409 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ATP6V0D2Q8N8Y2 350 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 KDM1BQ8NB78 822 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 TMEM35BQ8NCS4 154 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CADM4Q8NFZ8 388 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 OR52K2Q8NGK3 314 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CEP76Q8TAP6 659 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 PRCCQ92733 491 aaPredicted RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 IGSF8Q969P0 613 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ALG14Q96F25 216 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 PGAP3Q96FM1 320 aaPredicted RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 HSH2DQ96JZ2 352 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 NOX5Q96PH1 765 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 GBP4Q96PP9 640 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 FAM129BQ96TA1 746 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 GPR174Q9BXC1 333 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 NUSAP1Q9BXS6 441 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 STK33Q9BYT3 514 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 RSPH9Q9H1X1 276 aaPredicted RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 VPS16Q9H269 839 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 MTG2Q9H4K7 406 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 FAM204AQ9H8W3 233 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 FBRSQ9HAH7 460 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 BRD7Q9NPI1 651 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ANLNQ9NQW6 1124 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 PIGVQ9NUD9 493 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 FANCLQ9NW38 375 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 DDIT4Q9NX09 232 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ARHGEF38Q9NXL2 777 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 LIMA1Q9UHB6 759 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 SLC6A14Q9UN76 642 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 PLA2G4CQ9UP65 541 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 WASF3Q9UPY6 502 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ERVW-1Q9UQF0 538 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 OR51B4Q9Y5P0 310 aa6.85□□□□□ -1.31
TMEM116-208ENST00000549537 ASH1LQ9NR48 2969 aaKnown RBP6.85□□□□□ -1.31
TMEM116-208ENST00000549537 CACNA1EQ15878 2313 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 GON4LQ3T8J9 2241 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 ASCC3Q8N3C0 2202 aaKnown RBP6.84□□□□□ -1.31
TMEM116-208ENST00000549537 NAV2Q8IVL1 2488 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 SYNJ2BP-COX16A0A087WUM0 186 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 A0A1B0GVM2 712 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 TCAF2A6NFQ2 919 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 LRRC10BA6NIK2 292 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 METTL12A8MUP2 240 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 UPK3BL1B0FP48 263 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 UPK3BL2E5RIL1 263 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 F5H5T6 163 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 M0QYT0 321 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 NDUFS2O75306 463 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 PAGE1O75459 146 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 ADCY5O95622 1261 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 ASLP04424 464 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 CFIP05156 583 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 RPLP1P05386 114 aaKnown RBP6.84□□□□□ -1.31
TMEM116-208ENST00000549537 SRPRAP08240 638 aaKnown RBP6.84□□□□□ -1.31
TMEM116-208ENST00000549537 MMEP08473 750 aa6.84□□□□□ -1.31
TMEM116-208ENST00000549537 SLC2A3P11169 496 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms