RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TAC4Q86UU9 113 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 TRIM69Q86WT6 500 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 ARL14Q8N4G2 192 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 CARNMT1Q8N4J0 409 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 WDTC1Q8N5D0 677 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 ENOX1Q8TC92 643 aaKnown RBP12.52□□□□□ -0.41
DDX54-206ENST00000549271 IFI44Q8TCB0 444 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 MAPK15Q8TD08 544 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 SGF29Q96ES7 293 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 BTN2A3PQ96KV6 586 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 KDM4CQ9H3R0 1056 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 POPDC2Q9HBU9 364 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 DNAJC12Q9UKB3 198 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 MAN2B2Q9Y2E5 1009 aa12.52□□□□□ -0.41
DDX54-206ENST00000549271 TTC34A8MYJ7 566 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 PRAMEF26H0Y7S4 382 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 THAP12O43422 761 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 APOEP02649 317 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 ALPPL2P10696 532 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 GNA15P30679 374 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 MAT2AP31153 395 aaKnown RBP12.51□□□□□ -0.41
DDX54-206ENST00000549271 CLCN1P35523 988 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 USP8P40818 1118 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 CTSOP43234 321 aaPredicted RBP12.51□□□□□ -0.41
DDX54-206ENST00000549271 PLK1P53350 603 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 YWHAZP63104 245 aaKnown RBP12.51□□□□□ -0.41
DDX54-206ENST00000549271 CDKAL1Q5VV42 579 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 MMS22LQ6ZRQ5 1243 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
DDX54-206ENST00000549271 CFAP52Q8N1V2 620 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 STK40Q8N2I9 435 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 FAM149B1Q96BN6 582 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 KLHDC7BQ96G42 594 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDX54-206ENST00000549271 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.51□□□□□ -0.41
DDX54-206ENST00000549271 SLCO3A1Q9UIG8 710 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 CA5BQ9Y2D0 317 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 ICE1Q9Y2F5 2266 aa12.51□□□□□ -0.41
DDX54-206ENST00000549271 SCN8AQ9UQD0 1980 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 KCNU1A8MYU2 1149 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 K7ESM1 405 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 SCAMP1O15126 338 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 SLC7A4O43246 635 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 MED7O43513 233 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 PLRG1O43660 514 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 NOBOXO60393 691 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 RTN2O75298 545 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 PPFIA2O75334 1257 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 TNFSF15O95150 251 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 GJB6O95452 261 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 TRUB2O95900 331 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 MOCS2O96007 188 aaPredicted RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 GLI1P08151 1106 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 ITGA2BP08514 1039 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 PNMA6AP0CW24 399 aaPredicted RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 THEGLP0DJG4 465 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 TACR2P21452 398 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 EEF1GP26641 437 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 MZF1P28698 734 aaPredicted RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 METAP1P53582 386 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 OXCT1P55809 520 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 SULT2A1Q06520 285 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 ELAVL3Q14576 367 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 ZC3H12AQ5D1E8 599 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 KLHDC7AQ5VTJ3 777 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 TTC39BQ5VTQ0 682 aaPredicted RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 FAM71AQ8IYT1 594 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 APCDD1Q8J025 514 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 LGI2Q8N0V4 545 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 ATP6V0D2Q8N8Y2 350 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 TMEM145Q8NBT3 493 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 WDR36Q8NI36 951 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 NAA15Q9BXJ9 866 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
DDX54-206ENST00000549271 XPO7Q9UIA9 1087 aaKnown RBP12.5□□□□□ -0.41
DDX54-206ENST00000549271 E5RJQ4 531 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 F5H5T6 163 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 RNGTTO60942 597 aaKnown RBP12.49□□□□□ -0.41
DDX54-206ENST00000549271 TCEA3O75764 348 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 IL1BP01584 269 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 SLC2A3P11169 496 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 NNMTP40261 264 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 SRSF6Q13247 344 aaKnown RBP12.49□□□□□ -0.41
DDX54-206ENST00000549271 MTA1Q13330 715 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
DDX54-206ENST00000549271 DRAP1Q14919 205 aaPredicted RBP12.49□□□□□ -0.41
DDX54-206ENST00000549271 KRT31Q15323 416 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 SETMARQ53H47 684 aaPredicted RBP12.49□□□□□ -0.41
DDX54-206ENST00000549271 RNF219Q5W0B1 726 aaPredicted RBP12.49□□□□□ -0.41
DDX54-206ENST00000549271 RAP1GAP2Q684P5 730 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 FOXR1Q6PIV2 292 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 RBM44Q6ZP01 1051 aaKnown RBP12.49□□□□□ -0.41
DDX54-206ENST00000549271 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
DDX54-206ENST00000549271 CHSY1Q86X52 802 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms