RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC20A1Q8WUM9 679 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 CTNNBL1Q8WYA6 563 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 ALG3Q92685 438 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ADAM2Q99965 735 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 SLC25A51Q9H1U9 297 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ZHX1Q9UKY1 873 aaPredicted RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 MAPRE3Q9UPY8 281 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 SPECC1L-ADORA2AF8WAN1 911 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 H3BRJ5 948 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 SEC31AO94979 1220 aaKnown RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF883P0CG24 379 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF30P17039 623 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 SERPINB6P35237 376 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 GRIA4P48058 902 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 YWHAGP61981 247 aaKnown RBP eCLIP5□□□□□ -1.61
SCAF11-212ENST00000549162 WASHC5Q12768 1159 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 GOLGA7BQ2TAP0 167 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 COQ5Q5HYK3 327 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 FAXCQ5TGI0 409 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 KDM7AQ6ZMT4 941 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 PRR23BQ6ZRT6 265 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 RRAGAQ7L523 313 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ATP6V0D2Q8N8Y2 350 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 SMRP1Q8NCR6 262 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 FAM76AQ8TAV0 307 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ARRDC2Q8TBH0 407 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 TSPEARQ8WU66 669 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ANP32BQ92688 251 aaKnown RBP5□□□□□ -1.61
SCAF11-212ENST00000549162 GJA10Q969M2 543 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 COX14Q96I36 57 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 OSMRQ99650 979 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 CATSPERBQ9H7T0 1116 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 TMLHEQ9NVH6 421 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 LHX3Q9UBR4 397 aa5□□□□□ -1.61
SCAF11-212ENST00000549162 ARPC4-TTLL3A0A0A6YYG9 625 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ALDH2P05091 517 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SERPINB3P29508 390 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 NSFP46459 744 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 GCLMP48507 274 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TSPY1Q01534 308 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 GFOD2Q3B7J2 385 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 INAVAQ3KP66 663 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 FOXB2Q5VYV0 432 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 NCEH1Q6PIU2 408 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 PDZD4Q76G19 769 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 MAATS1Q7Z4T9 603 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SPATS2Q86XZ4 545 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SYCP3Q8IZU3 236 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 RHEBL1Q8TAI7 183 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 PDCD6IPQ8WUM4 868 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 HAUS1Q96CS2 278 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SPATA13Q96N96 652 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 CSPG4P5Q96PW8 444 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 NUP85Q9BW27 656 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 P2RY12Q9H244 342 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ERVMER34-1Q9H9K5 563 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TRMT13Q9NUP7 481 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 USP36Q9P275 1121 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ABT1Q9ULW3 272 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SOX13Q9UN79 622 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 C17orf113A0A1B0GUU1 675 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 E9PAM4 449 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 PNLIPP16233 465 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 GARSP41250 739 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ARCN1P48444 511 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 OTUD4Q01804 1114 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ROR1Q01973 937 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SP140Q13342 867 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ITIH4Q14624 930 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 C1QTNF12Q5T7M4 302 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 NADSYN1Q6IA69 706 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 CXCL17Q6UXB2 119 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 GK5Q6ZS86 529 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 MSANTD1Q6ZTZ1 278 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 CCDC89Q8N998 374 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TBC1D20Q96BZ9 403 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TEKT5Q96M29 485 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 WDR24Q96S15 920 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 PI4K2AQ9BTU6 479 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 NSUN3Q9H649 340 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 FZD1Q9UP38 647 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 AKT3Q9Y243 479 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 WBP11Q9Y2W2 641 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF711Q9Y462 761 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 YIPF1Q9Y548 306 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 DOCK6Q96HP0 2047 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TMEM110-MUSTN1A8MSY1 372 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ATXN1LP0C7T5 689 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 MPC1LP0DKB6 136 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 SRGAP2BP0DMP2 458 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 IL1R2P27930 398 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 PRDX6P30041 224 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 ZNF140P52738 457 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 MRPS21P82921 87 aaKnown RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 YWHAHQ04917 246 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 PDK1Q15118 436 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 OVOS1Q6IE37 1185 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 C8orf82Q6P1X6 216 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-212ENST00000549162 GPR155Q7Z3F1 870 aa4.99□□□□□ -1.61
SCAF11-212ENST00000549162 TMC3Q7Z5M5 1100 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms