RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 EFCAB12Q6NXP0 572 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 POTEHQ6S545 545 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 SLC26A9Q7LBE3 791 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 TMEM135Q86UB9 458 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 ASB7Q9H672 318 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 AP4S1Q9Y587 144 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 PLOD2O00469 737 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 PPEF2O14830 753 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 SETSIPP0DME0 302 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 ARSAP15289 507 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 GLUD2P49448 558 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 CNTD1Q8N815 330 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 C7orf31Q8N865 590 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 DNAAF3Q8N9W5 541 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 FNDC8Q8TC99 324 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 AFG1LQ8WV93 481 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 ASB9Q96DX5 294 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 SCYL1Q96KG9 808 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 GPR20Q99678 358 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 SLC29A1Q99808 456 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 TMEM79Q9BSE2 394 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 TRPV6Q9H1D0 765 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 DPEP3Q9H4B8 488 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 IARS2Q9NSE4 1012 aaKnown RBP13.94□□□□□ -0.18
HDAC7-228ENST00000548938 IGSF9Q9P2J2 1179 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 SCN4AP35499 1836 aa13.94□□□□□ -0.18
HDAC7-228ENST00000548938 SYNJ2BP-COX16A0A087WUM0 186 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 CCDC78A2IDD5 438 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 SOWAHBA6NEL2 793 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 H3BNH8 94 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 CXCL11O14625 94 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 MCF2P10911 925 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 RPL10P27635 214 aaKnown RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 TPP2P29144 1249 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 ADSLP30566 484 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 AVPR1AP37288 418 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 PSME3P61289 254 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 RALGDSQ12967 914 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 DPYSQ14117 519 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 GRM3Q14832 879 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 CERCAMQ5T4B2 595 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 KRT80Q6KB66 452 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 ZNF554Q86TJ5 538 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 KCNMB4Q86W47 210 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 RIOX2Q8IUF8 465 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 RNF139Q8WU17 664 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 KCTD4Q8WVF5 259 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 APOL2Q9BQE5 337 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 C1QTNF1Q9BXJ1 281 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 IL22Q9GZX6 179 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 SPATC1LQ9H0A9 340 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 OLAHQ9NV23 265 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 COX16Q9P0S2 106 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 KLHL8Q9P2G9 620 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 TDRKHQ9Y2W6 561 aaKnown RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 SNX13Q9Y5W8 968 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 E7ENX8 843 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 TIMM44O43615 452 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 C8BP07358 591 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 ADORA2BP29275 332 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 PITX1P78337 314 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 AMHR2Q16671 573 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 GLRA4Q5JXX5 417 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 ZDHHC17Q8IUH5 632 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 RMND5BQ96G75 393 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 CIB1Q99828 191 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 OSBPL11Q9BXB4 747 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 MAF1Q9H063 256 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 R3HDMLQ9H3Y0 253 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 PRMT7Q9NVM4 692 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 BFARQ9NZS9 450 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 MID2Q9UJV3 735 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 FZD10Q9ULW2 581 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 FAF1Q9UNN5 650 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-228ENST00000548938 KCNH4Q9UQ05 1017 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 MYRFQ9Y2G1 1151 aa13.93□□□□□ -0.18
HDAC7-228ENST00000548938 ZNF638Q14966 1978 aaKnown RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 GPR162Q16538 588 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 DGKDQ16760 1214 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 FIBCD1Q8N539 461 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 NDRG1Q92597 394 aaKnown RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 SLCO4A1Q96BD0 722 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 UNKQ9C0B0 810 aaKnown RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 VTI1BQ9UEU0 232 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 CABYRO75952 493 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 APOA4P06727 396 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 HDCP19113 662 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 EDNRBP24530 442 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 HK2P52789 917 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 IGBP1P78318 339 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 TRIM25Q14258 630 aaKnown RBP13.92□□□□□ -0.18
HDAC7-228ENST00000548938 EML3Q32P44 896 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 Q3C1V9 767 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 CYP2R1Q6VVX0 501 aa13.92□□□□□ -0.18
HDAC7-228ENST00000548938 CCNYL1Q8N7R7 359 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms