RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 HOXD12P35452 270 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 GJC1P36383 396 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 SSR1P43307 286 aaKnown RBP16.1■□□□□ 0.17
DDX54-205ENST00000548786 RECQLP46063 649 aaPredicted RBP16.1■□□□□ 0.17
DDX54-205ENST00000548786 VASPP50552 380 aaPredicted RBP16.1■□□□□ 0.17
DDX54-205ENST00000548786 ADPRHP54922 357 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 AIF1P55008 147 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 CNTN1Q12860 1018 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 KIAA0895LQ68EN5 471 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 DPY19L3Q6ZPD9 716 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 FNIP1Q8TF40 1166 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 DNASE2BQ8WZ79 361 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 CCDC114Q96M63 670 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 ACE2Q9BYF1 805 aaPredicted RBP16.1■□□□□ 0.17
DDX54-205ENST00000548786 RBSNQ9H1K0 784 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 MAGEH1Q9H213 219 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 CATSPERBQ9H7T0 1116 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 CAPN10Q9HC96 672 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 SPTLC3Q9NUV7 552 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 SUSD2Q9UGT4 822 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 PPM1HQ9ULR3 514 aa16.1■□□□□ 0.17
DDX54-205ENST00000548786 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3DA0A087WVF3 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3IA0A087WXS9 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3EA0A087X179 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3KA0A087X1G2 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 A0A1B0GTW7 788 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3FA6NER0 549 aaPredicted RBP16.09■□□□□ 0.17
DDX54-205ENST00000548786 LRRC72A6NJI9 287 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3LB9A6J9 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 RASA4BC9J798 803 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 BCAT2O15382 392 aaPredicted RBP16.09■□□□□ 0.17
DDX54-205ENST00000548786 RASA4O43374 803 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 AKR1B10O60218 316 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 ZNF821O75541 412 aaPredicted RBP16.09■□□□□ 0.17
DDX54-205ENST00000548786 CD160O95971 181 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 IGHV4-34P06331 123 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3HP0C7X1 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 C7P10643 843 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 GKP32189 559 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 ETFBP38117 255 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 CLCN6P51797 869 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 LIMK1P53667 647 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 PPP2CBP62714 309 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 PPP2CAP67775 309 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 SFSWAPQ12872 951 aaKnown RBP16.09■□□□□ 0.17
DDX54-205ENST00000548786 ARSIQ5FYB1 569 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 FAM46CQ5VWP2 391 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3GQ6DHY5 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TXNRD3NBQ6F5E7 133 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3CQ6IPX1 549 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 RFX8Q6ZV50 586 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 RABEPKQ7Z6M1 372 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 TBC1D3Q8IZP1 549 aaPredicted RBP16.09■□□□□ 0.17
DDX54-205ENST00000548786 CHP1Q99653 195 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 ZDHHC6Q9H6R6 413 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 CTTNBP2NLQ9P2B4 639 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 IL36AQ9UHA7 158 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 FZD4Q9ULV1 537 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 NENFQ9UMX5 172 aa16.09■□□□□ 0.17
DDX54-205ENST00000548786 PCDH15Q96QU1 1955 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 A0A1B0GVT2 93 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 TMEM110-MUSTN1A8MSY1 372 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 ARHGAP33O14559 1287 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 ALOX15BO15296 676 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 FGF10O15520 208 aaPredicted RBP16.08■□□□□ 0.16
DDX54-205ENST00000548786 LEFTY1O75610 366 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 MAT2AP31153 395 aaKnown RBP16.08■□□□□ 0.16
DDX54-205ENST00000548786 CSNK1EP49674 416 aaKnown RBP16.08■□□□□ 0.16
DDX54-205ENST00000548786 CCNHP51946 323 aaPredicted RBP16.08■□□□□ 0.16
DDX54-205ENST00000548786 GRIK2Q13002 908 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 SLC18A3Q16572 532 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 PPM1JQ5JR12 505 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 ATXN7L2Q5T6C5 722 aaPredicted RBP16.08■□□□□ 0.16
DDX54-205ENST00000548786 AGBL4Q5VU57 503 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 MINDY1Q8N5J2 469 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 OR2T34Q8NGX1 318 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 ZNF564Q8TBZ8 553 aaPredicted RBP16.08■□□□□ 0.16
DDX54-205ENST00000548786 ARRDC3Q96B67 414 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 PCED1AQ9H1Q7 454 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 TM9SF3Q9HD45 589 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX54-205ENST00000548786 MFHAS1Q9Y4C4 1052 aa16.08■□□□□ 0.16
DDX54-205ENST00000548786 MED19A0JLT2 244 aaPredicted RBP16.07■□□□□ 0.16
DDX54-205ENST00000548786 AKR1B15C9JRZ8 316 aaPredicted RBP16.07■□□□□ 0.16
DDX54-205ENST00000548786 KDELR3O43731 214 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 TMCC1O94876 653 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 CD27P26842 260 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 PCK1P35558 622 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 SLC20A2Q08357 652 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 PIGHQ14442 188 aaPredicted RBP16.07■□□□□ 0.16
DDX54-205ENST00000548786 CARD16Q5EG05 197 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 SARM1Q6SZW1 724 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 PCDH20Q8N6Y1 951 aaKnown RBP16.07■□□□□ 0.16
DDX54-205ENST00000548786 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
DDX54-205ENST00000548786 EXOC2Q96KP1 924 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 SLC6A18Q96N87 628 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 CEP44Q9C0F1 390 aa16.07■□□□□ 0.16
DDX54-205ENST00000548786 RETREG1Q9H6L5 497 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms