RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC22A18ASQ8N1D0 253 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 CACTIN-AS1Q8N1I8 211 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 ZNF248Q8NDW4 579 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 OR7D4Q8NG98 312 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 OR2A12Q8NGT7 310 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 MAPK15Q8TD08 544 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 BMFQ96LC9 184 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 DEPDC7Q96QD5 511 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 SYNCQ9H7C4 482 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 PIGVQ9NUD9 493 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 IL36AQ9UHA7 158 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 IPO11Q9UI26 975 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 ACTL7AQ9Y615 435 aa12.23□□□□□ -0.45
TRAFD1-205ENST00000548277 UNC13CQ8NB66 2214 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 GCN1Q92616 2671 aaKnown RBP12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 POM121BA6NF01 834 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 NEMP2A6NFY4 417 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 K7ESM1 405 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 RAD51BO15315 384 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 HSF2BPO75031 334 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 LEFTY1O75610 366 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 PRNPP04156 253 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 ALPPL2P10696 532 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 CKMT1AP12532 417 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 TGM2P21980 687 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 NOS2P35228 1153 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 KRT9P35527 623 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 PPP1R2P41236 205 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 SULT1E1P49888 294 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 SLC6A3Q01959 620 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 CCDC15Q0P6D6 951 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 MORC3Q14149 939 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 FGL2Q14314 439 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 DEFB133Q30KQ1 61 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 C3orf38Q5JPI3 329 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 CDCP2Q5VXM1 449 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 DPY19L3Q6ZPD9 716 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 ERN2Q76MJ5 926 aaKnown RBP12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 TMIEQ8NEW7 156 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 IFI44Q8TCB0 444 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 KCNE4Q8WWG9 221 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 CCDC114Q96M63 670 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 ZNF578Q96N58 590 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 SLC17A9Q9BYT1 436 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 SATB2Q9UPW6 733 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 TBC1D30Q9Y2I9 924 aa12.22□□□□□ -0.45
TRAFD1-205ENST00000548277 COL27A1Q8IZC6 1860 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 A6NNZ2 444 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 I6L893 689 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 SCAMP1O15126 338 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 CASC3O15234 703 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 DAB1O75553 588 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 GNA14O95837 355 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 GLI1P08151 1106 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 OR1E1P30953 314 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 GKP32189 559 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 TMPRSS3P57727 454 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 DEUP1Q05D60 604 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 PAK1Q13153 545 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 DRAP1Q14919 205 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 PTPN20Q4JDL3 420 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 NEK5Q6P3R8 708 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 C22orf39Q6P5X5 142 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 TRIM65Q6PJ69 517 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 OLFML1Q6UWY5 402 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 LRRC31Q6UY01 552 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 RYBPQ8N488 228 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 LSM14AQ8ND56 463 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 LMX1AQ8TE12 382 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 COL26A1Q96A83 441 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 VCPIP1Q96JH7 1222 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 FEM1CQ96JP0 617 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 SEMA4CQ9C0C4 833 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 PDCL3Q9H2J4 239 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 SYNDIG1Q9H7V2 258 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 POLR1BQ9H9Y6 1135 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 ASNSD1Q9NWL6 643 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 NLGN3Q9NZ94 848 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 AJAP1Q9UKB5 411 aaPredicted RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 HS3ST2Q9Y278 367 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 FCF1Q9Y324 198 aaKnown RBP12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 U3KQA8 63 aa12.21□□□□□ -0.45
TRAFD1-205ENST00000548277 AGRPO00253 132 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 LSSP48449 732 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 DUSP3P51452 185 aaPredicted RBP12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 NEK3P51956 506 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 HNRNPKP61978 463 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 PTK2Q05397 1052 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 C1orf61Q13536 156 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 PDE1CQ14123 709 aaPredicted RBP12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 FZD2Q14332 565 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 MEA1Q16626 185 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 C2CD6Q53TS8 623 aa12.2□□□□□ -0.46
TRAFD1-205ENST00000548277 OTUD1Q5VV17 481 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms