RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SLC31A1O15431 190 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SLC7A4O43246 635 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SMAD6O43541 496 aaKnown RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 TNFSF14O43557 240 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 PCDHGA12O60330 932 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 GJB6O95452 261 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 LDOC1O95751 146 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 ITGAVP06756 1048 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 GLDCP23378 1020 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CHRNA3P32297 505 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 ADRA1BP35368 520 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SOX5P35711 763 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SCNN1AP37088 669 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 STAT1P42224 750 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 RECQLP46063 649 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 DNA2P51530 1060 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 COPB1P53618 953 aaKnown RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 NOMO3P69849 1222 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CDR2Q01850 454 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SCAPQ12770 1279 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 BNIP3Q12983 259 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SYCP1Q15431 976 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 C15orf59Q2T9L4 293 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CCDC14Q49A88 953 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 RAB6CQ53S08 254 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SLC45A4Q5BKX6 768 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 C6orf118Q5T5N4 469 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CDKAL1Q5VV42 579 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 RWDD4Q6NW29 188 aaKnown RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CCNI2Q6ZMN8 369 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CLEC17AQ6ZS10 378 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SETD3Q86TU7 594 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 DRC7Q8IY82 874 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 EID2Q8N6I1 236 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CHST14Q8NCH0 376 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 OR2A12Q8NGT7 310 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 BAP1Q92560 729 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CCDC114Q96M63 670 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 GBP4Q96PP9 640 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 HAPLN3Q96S86 360 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 PSMB7Q99436 277 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 ELF4Q99607 663 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 C11orf70Q9BRQ4 267 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 MAGEB5Q9BZ81 275 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 RAB6CQ9H0N0 254 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 GANQ9H2C0 597 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 GDF3Q9NR23 364 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SEPT11Q9NVA2 429 aaKnown RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 EVA1BQ9NVM1 165 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 TMEM51Q9NW97 253 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 ARHGAP20Q9P2F6 1191 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 OR12D3Q9UGF7 316 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 NOCTQ9UK39 431 aaKnown RBP6.86□□□□□ -1.31
SCAF11-211ENST00000547950 HS3ST2Q9Y278 367 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 CA5BQ9Y2D0 317 aa6.86□□□□□ -1.31
SCAF11-211ENST00000547950 SPAG17Q6Q759 2223 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 MYO18AQ92614 2054 aaKnown RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 IGLV3-10A0A075B6K4 115 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 A0A1W2PQU0 124 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ILVBLA1L0T0 632 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 FAM149AA5PLN7 773 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 RNF103O00237 685 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 TAF4O00268 1085 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ALOX15BO15296 676 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 SIAH2O43255 324 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 LATO43561 262 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 PLRG1O43660 514 aaKnown RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 RNGTTO60942 597 aaKnown RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 PCDH8O95206 1070 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 CYP1A1P04798 512 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 CTSLP07711 333 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 KRT3P12035 628 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 PRLRP16471 622 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 MMP8P22894 467 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 SDC4P31431 198 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ACVRL1P37023 503 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ARRB1P49407 418 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 NXPH1P58417 271 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 TAS2R38P59533 333 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 FMO1Q01740 532 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 GNA12Q03113 381 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 UBXN1Q04323 297 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 CCDC15Q0P6D6 951 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 SHBQ15464 509 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 INAVAQ3KP66 663 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ARL13BQ3SXY8 428 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 SETMARQ53H47 684 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ACBD5Q5T8D3 534 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 AGBL4Q5VU57 503 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 NAPEPLDQ6IQ20 393 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 RETSATQ6NUM9 610 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 DHRS13Q6UX07 377 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 LEKR1Q6ZMV7 388 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 DPY19L3Q6ZPD9 716 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ZNF677Q86XU0 584 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 SPATS2Q86XZ4 545 aaKnown RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 RYBPQ8N488 228 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-211ENST00000547950 MFSD2AQ8NA29 543 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 TMIEQ8NEW7 156 aa6.85□□□□□ -1.31
SCAF11-211ENST00000547950 ANKRD20A12PQ8NF67 263 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms