RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 CAPN10Q9HC96 672 aa11.15□□□□□ -0.62
GCN1-202ENST00000547263 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.15□□□□□ -0.62
GCN1-202ENST00000547263 DLL3Q9NYJ7 618 aa11.15□□□□□ -0.62
GCN1-202ENST00000547263 CTTNBP2NLQ9P2B4 639 aa11.15□□□□□ -0.62
GCN1-202ENST00000547263 TPX2Q9ULW0 747 aaKnown RBP11.15□□□□□ -0.62
GCN1-202ENST00000547263 MFHAS1Q9Y4C4 1052 aa11.15□□□□□ -0.62
GCN1-202ENST00000547263 ACTL7AQ9Y615 435 aa11.15□□□□□ -0.62
GCN1-202ENST00000547263 BTNL10A8MVZ5 291 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 H3BRJ5 948 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 TM4SF5O14894 197 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 LATO43561 262 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 PRAMEF11O60813 436 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 RNASEH1O60930 286 aaKnown RBP11.14□□□□□ -0.63
GCN1-202ENST00000547263 PEX11BO96011 259 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 ACADMP11310 421 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 ITPKAP23677 461 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 CHRNA3P32297 505 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 NUMBP49757 651 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 ADPRHP54922 357 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 TAS2R38P59533 333 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 SFSWAPQ12872 951 aaKnown RBP11.14□□□□□ -0.63
GCN1-202ENST00000547263 DPYSL3Q14195 570 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 SMTNL2Q2TAL5 461 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 CARD16Q5EG05 197 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 PIP5KL1Q5T9C9 394 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 LRRC38Q5VT99 294 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 AGBL4Q5VU57 503 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 IL31Q6EBC2 164 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 DPY19L3Q6ZPD9 716 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 CYP2U1Q7Z449 544 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 DSG4Q86SJ6 1040 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 OR2AP1Q8NGE2 309 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 PIP4K2CQ8TBX8 421 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 HSPA12BQ96MM6 686 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 ZNF670Q9BS34 389 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 SPON2Q9BUD6 331 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 GPR174Q9BXC1 333 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 BTBD1Q9H0C5 482 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 NEUROG2Q9H2A3 272 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 ZWILCHQ9H900 591 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 ETNK2Q9NVF9 386 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 FBXL12Q9NXK8 326 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 LHX3Q9UBR4 397 aa11.14□□□□□ -0.63
GCN1-202ENST00000547263 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.14□□□□□ -0.63
GCN1-202ENST00000547263 REXO2Q9Y3B8 237 aaKnown RBP11.14□□□□□ -0.63
GCN1-202ENST00000547263 EPN1Q9Y6I3 576 aaPredicted RBP11.14□□□□□ -0.63
GCN1-202ENST00000547263 GON4LQ3T8J9 2241 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 A0A1W2PP55 124 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 LNP1A1A4G5 178 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 C3orf70A6NLC5 250 aaPredicted RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 PRR5-ARHGAP8B1AHC4 643 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 C1QTNF3-AMACRE9PGA6 284 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 PJA2O43164 708 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 MAP3K13O43283 966 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 PLRG1O43660 514 aaKnown RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 TMCC1O94876 653 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 NDUFA10O95299 355 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 SEMA4FO95754 770 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 PRNPP04156 253 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CD48P09326 243 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 SLC1A1P43005 524 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 DHPSP49366 369 aaPredicted RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 CCR5P51681 352 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CCNHP51946 323 aaPredicted RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 ARHGAP8P85298 464 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CREB5Q02930 508 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 PAFAH1B3Q15102 231 aaKnown RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 PDK2Q15119 407 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CYTH1Q15438 398 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 TAZQ16635 292 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 HADHQ16836 314 aaKnown RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 ATP13A4Q4VNC1 1196 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 FAM46CQ5VWP2 391 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 RAD9BQ6WBX8 426 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 KIAA2013Q8IYS2 634 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CHST14Q8NCH0 376 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 OR2T34Q8NGX1 318 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 PCDH19Q8TAB3 1148 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 ARRDC3Q96B67 414 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CCDC114Q96M63 670 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 HDAC8Q9BY41 377 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 C6orf106Q9H6K1 298 aaPredicted RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 RXFP3Q9NSD7 469 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.13□□□□□ -0.63
GCN1-202ENST00000547263 ANKRD36A6QL64 1941 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CEP250Q9BV73 2442 aa11.13□□□□□ -0.63
GCN1-202ENST00000547263 CFAP54Q96N23 3096 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 TP53BP1Q12888 1972 aaPredicted RBP11.12□□□□□ -0.63
GCN1-202ENST00000547263 DOCK9Q9BZ29 2069 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 TSPAN11A1L157 253 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 RCCD1A6NED2 376 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 ARHGAP42A6NI28 874 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 SOWAHDA6NJG2 315 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 PATE3B3GLJ2 98 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 J3KR12 359 aa11.12□□□□□ -0.63
GCN1-202ENST00000547263 CDX4O14627 284 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms