RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 KLK6Q92876 244 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 BMFQ96LC9 184 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 FAM81BQ96LP2 452 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 TBCBQ99426 244 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 MYOCQ99972 504 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 TKTL2Q9H0I9 626 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 CLCA2Q9UQC9 943 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
COPS7A-221ENST00000546229 TDRD6O60522 2096 aaKnown RBP12.85□□□□□ -0.35
COPS7A-221ENST00000546229 LRP4O75096 1905 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 BOD1L1Q8NFC6 3051 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 TK2O00142 265 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 SLC31A1O15431 190 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 DXOO77932 396 aaKnown RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 HNRNPA2B1P22626 353 aaKnown RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 FLT3P36888 993 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 CLDN2P57739 230 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 ARF5P84085 180 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 STAT4Q14765 748 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 OR6B2Q6IFH4 312 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 KYAT3Q6YP21 454 aaKnown RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 KDM7AQ6ZMT4 941 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 DPY19L3Q6ZPD9 716 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 XYLT1Q86Y38 959 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 SPACA3Q8IXA5 215 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 FAM181AQ8N9Y4 354 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 OR7D4Q8NG98 312 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 IFT43Q96FT9 208 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 KLHDC7BQ96G42 594 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 C1orf74Q96LT6 269 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 FCRL3Q96P31 734 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 KLF6Q99612 283 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 C2orf49Q9BVC5 232 aaPredicted RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 NAA15Q9BXJ9 866 aaKnown RBP12.84□□□□□ -0.35
COPS7A-221ENST00000546229 MUC3BQ9H195 1237 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 MPP6Q9NZW5 540 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 TMEM59LQ9UK28 342 aa12.84□□□□□ -0.35
COPS7A-221ENST00000546229 POM121BA6NF01 834 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 KPNA3O00505 521 aaPredicted RBP12.83□□□□□ -0.36
COPS7A-221ENST00000546229 OPA1O60313 960 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 LEFTY1O75610 366 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 MT-CO3P00414 261 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 RHOCP08134 193 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 MYF5P13349 255 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 SERPINH1P50454 418 aaKnown RBP12.83□□□□□ -0.36
COPS7A-221ENST00000546229 SKOR1P84550 965 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 FZD2Q14332 565 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 RAB6CQ53S08 254 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 ERN2Q76MJ5 926 aaKnown RBP12.83□□□□□ -0.36
COPS7A-221ENST00000546229 PARS2Q7L3T8 475 aaKnown RBP12.83□□□□□ -0.36
COPS7A-221ENST00000546229 TFAP2DQ7Z6R9 452 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 ZDHHC17Q8IUH5 632 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 ATP11CQ8NB49 1132 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 GRIN3AQ8TCU5 1115 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 FGF11Q92914 225 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 RNF34Q969K3 372 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 SIK2Q9H0K1 926 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 RAB6CQ9H0N0 254 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 TNKS2Q9H2K2 1166 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 ASCL3Q9NQ33 180 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.83□□□□□ -0.36
COPS7A-221ENST00000546229 NLGN3Q9NZ94 848 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 DNAJC12Q9UKB3 198 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 PNMA8BQ9ULN7 279 aaPredicted RBP12.83□□□□□ -0.36
COPS7A-221ENST00000546229 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 ACTL7AQ9Y615 435 aa12.83□□□□□ -0.36
COPS7A-221ENST00000546229 ILVBLA1L0T0 632 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 AP1G1O43747 822 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 ENDOD1O94919 500 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 PRNPP04156 253 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 ADRB3P13945 408 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 NME1P15531 152 aaKnown RBP12.82□□□□□ -0.36
COPS7A-221ENST00000546229 ITGB7P26010 798 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 AKT2P31751 481 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 USP8P40818 1118 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 ABL2P42684 1182 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 SULT1E1P49888 294 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 KRT83P78385 493 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 PTK2Q05397 1052 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 SLC25A52Q3SY17 297 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 ARSIQ5FYB1 569 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 ZNF783Q6ZMS7 281 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 LSM14AQ8ND56 463 aaKnown RBP12.82□□□□□ -0.36
COPS7A-221ENST00000546229 ZNF548Q8NEK5 533 aaPredicted RBP12.82□□□□□ -0.36
COPS7A-221ENST00000546229 SLC39A7Q92504 469 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 APOLD1Q96LR9 279 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 CEP44Q9C0F1 390 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 NDFIP2Q9NV92 336 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 IL36AQ9UHA7 158 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 GGT7Q9UJ14 662 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 FHOD1Q9Y613 1164 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
COPS7A-221ENST00000546229 SPTY2D1-AS1A0A0U1RR47 76 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 A6NNZ2 444 aa12.81□□□□□ -0.36
COPS7A-221ENST00000546229 K7ESM1 405 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms