RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	CDC14A	Q9UNH5	594 aa		10.33	□□□□□ -0.76
UBC-213	ENST00000546120	MTF2	Q9Y483	593 aa	Predicted RBP	10.33	□□□□□ -0.76
UBC-213	ENST00000546120	TRAF6	Q9Y4K3	522 aa		10.33	□□□□□ -0.76
UBC-213	ENST00000546120	TLL2	Q9Y6L7	1015 aa		10.33	□□□□□ -0.76
UBC-213	ENST00000546120	ARFGEF1	Q9Y6D6	1849 aa		10.33	□□□□□ -0.76
UBC-213	ENST00000546120	MYH11	P35749	1972 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	LOC102724428	A0A0B4J2F2	783 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	HMX2	A2RU54	273 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ERI2	A8K979	691 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	NOTO	A8MTQ0	251 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	FADS2P1	A8MWK0	482 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	CXorf49	A8MYA2	514 aa	Predicted RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	MSI1	O43347	362 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	UGT2B11	O75310	529 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	LRCH4	O75427	683 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	BANF1	O75531	89 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	DDHD2	O94830	711 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ALX3	O95076	343 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	SNX4	O95219	450 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	TRUB2	O95900	331 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ALDOA	P04075	364 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	KRT8	P05787	483 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	SNRPB2	P08579	225 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	TNNI1	P19237	187 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ITIH1	P19827	911 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	YWHAB	P31946	246 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	NPTX2	P47972	431 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ZNF143	P52747	638 aa	Predicted RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	PPP5C	P53041	499 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	PEX3	P56589	373 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	KCNQ4	P56696	695 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	SIK1	P57059	783 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	RPL7A	P62424	266 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ZNF252P-AS1	Q0IIN9	211 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	GRIK2	Q13002	908 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	STIL	Q15468	1287 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	UGP2	Q16851	508 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ATP13A4	Q4VNC1	1196 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	SLC9A4	Q6AI14	798 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	IQSEC1	Q6DN90	963 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	GTF2IRD2B	Q6EKJ0	949 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	LCN8	Q6JVE9	175 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	XKR5	Q6UX68	686 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	C3orf67	Q6ZVT6	689 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	CLEC14A	Q86T13	490 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	GTF2IRD2	Q86UP8	949 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	CDR2L	Q86X02	465 aa	Predicted RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	KSR1	Q8IVT5	923 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	MYO1H	Q8N1T3	1032 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	SPERT	Q8NA61	448 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ABHD11	Q8NFV4	315 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	LPGAT1	Q92604	370 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	MARVELD3	Q96A59	401 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ZNF486	Q96H40	463 aa	Predicted RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	UBXN10	Q96LJ8	280 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	KLHL32	Q96NJ5	620 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ASB2	Q96Q27	587 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	WDR18	Q9BV38	432 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	LIN28A	Q9H9Z2	209 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	NMRAL1	Q9HBL8	299 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	TM9SF3	Q9HD45	589 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ANLN	Q9NQW6	1124 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	TBC1D13	Q9NVG8	400 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ACTR3B	Q9P1U1	418 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ARHGAP28	Q9P2N2	729 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	PI4KB	Q9UBF8	816 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	ZNF639	Q9UID6	485 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	USP18	Q9UMW8	372 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	SCAF8	Q9UPN6	1271 aa	Known RBP	10.32	□□□□□ -0.76
UBC-213	ENST00000546120	PCDHGA7	Q9Y5G6	932 aa		10.32	□□□□□ -0.76
UBC-213	ENST00000546120	GRXCR2	A6NFK2	248 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	TCAF2	A6NFQ2	919 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	TPP1	O14773	563 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	HNRNPDL	O14979	420 aa	Known RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	MDM4	O15151	490 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	SLC16A4	O15374	487 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	CFLAR	O15519	480 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	PRPSAP2	O60256	369 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	DGAT1	O75907	488 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	SRP72	O76094	671 aa	Known RBP	10.31	□□□□□ -0.76
UBC-213	ENST00000546120	APRT	P07741	180 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	GABRB3	P28472	473 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	CCND2	P30279	289 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	HPCAL1	P37235	193 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	LIMK2	P53671	638 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	BCAR1	P56945	870 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	DEFA1	P59665	94 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	DEFA3	P59666	94 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	IGBP1	P78318	339 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	MVK	Q03426	396 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	LRP8	Q14114	963 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	GK3P	Q14409	553 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	RFX4	Q33E94	735 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	CYP4A22	Q5TCH4	519 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	UGT3A1	Q6NUS8	523 aa		10.31	□□□□□ -0.76
UBC-213	ENST00000546120	TATDN1	Q6P1N9	297 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms