RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 C9orf64Q5T6V5 341 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 C22orf39Q6P5X5 142 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 NUDT18Q6ZVK8 323 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 CREG2Q8IUH2 290 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 TSEN2Q8NCE0 465 aaKnown RBP16.59■□□□□ 0.25
LIMS2-217ENST00000545738 UCMAQ8WVF2 138 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 EXOC2Q96KP1 924 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 TSGA13Q96PP4 275 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 TM6SF2Q9BZW4 377 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 SLC6A17Q9H1V8 727 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 PRDM16Q9HAZ2 1276 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 LHX3Q9UBR4 397 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 UBA2Q9UBT2 640 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-217ENST00000545738 SLC25A13Q9UJS0 675 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 MMP17Q9ULZ9 603 aa16.59■□□□□ 0.25
LIMS2-217ENST00000545738 FRYLO94915 3013 aa16.58■□□□□ 0.25
LIMS2-217ENST00000545738 TTC24A2A3L6 582 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-217ENST00000545738 EPHX1P07099 455 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 CLCN6P51797 869 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 SATB1Q01826 763 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 IHHQ14623 411 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 HNRNPA1L2Q32P51 320 aaKnown RBP16.58■□□□□ 0.24
LIMS2-217ENST00000545738 RETSATQ6NUM9 610 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 FBXL6Q8N531 539 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 CCNYQ8ND76 341 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 SLC35B2Q8TB61 432 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 C1orf54Q8WWF1 131 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 MAML1Q92585 1016 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 PBKQ96KB5 322 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 DNPEPQ9ULA0 475 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 HPCAL4Q9UM19 191 aa16.58■□□□□ 0.24
LIMS2-217ENST00000545738 SIN3BO75182 1162 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 HOXB2P14652 356 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 MX2P20592 715 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 CCNCP24863 283 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 GKP32189 559 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 METAP1P53582 386 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 AP1B1Q10567 949 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 PDK1Q15118 436 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 CRY1Q16526 586 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 ACCSLQ4AC99 568 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 ATXN7L2Q5T6C5 722 aaPredicted RBP16.57■□□□□ 0.24
LIMS2-217ENST00000545738 CCDC13Q8IYE1 715 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 CNTD1Q8N815 330 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 PRELID2Q8N945 189 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 KDM1BQ8NB78 822 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 CHST14Q8NCH0 376 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 OR2A12Q8NGT7 310 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 OR6K2Q8NGY2 324 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 CAPZA3Q96KX2 299 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 QKIQ96PU8 341 aaKnown RBP eCLIP16.57■□□□□ 0.24
LIMS2-217ENST00000545738 MKRN2Q9H000 416 aaKnown RBP16.57■□□□□ 0.24
LIMS2-217ENST00000545738 PRSS16Q9NQE7 514 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 TTC7AQ9ULT0 858 aaPredicted RBP16.57■□□□□ 0.24
LIMS2-217ENST00000545738 SAR1BQ9Y6B6 198 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 DNAH14Q0VDD8 3507 aa16.57■□□□□ 0.24
LIMS2-217ENST00000545738 MATN3O15232 486 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CTSLP07711 333 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 RBP3P10745 1247 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 PRLRP16471 622 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 RBL1P28749 1068 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CETN2P41208 172 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 COPAP53621 1224 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 GDF10P55107 478 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 EIF3EP60228 445 aaKnown RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 MAXP61244 160 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 WASHC5Q12768 1159 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 LBRQ14739 615 aaKnown RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 LONRF2Q1L5Z9 754 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 INO80DQ53TQ3 878 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CCDC181Q5TID7 509 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 SYT13Q7L8C5 426 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 MAML2Q8IZL2 1156 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 TEX26Q8N6G2 289 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 ACTRT1Q8TDG2 376 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 AP1M1Q9BXS5 423 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CD93Q9NPY3 652 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 EML5Q05BV3 1969 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 ANKRD36A6QL64 1941 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CXorf51AA0A1B0GTR3 108 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 ZSCAN5CA6NGD5 496 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CES2O00748 559 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 NCAM2O15394 837 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 INSIG1O15503 277 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 LIASO43766 372 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 BNIP3LO60238 219 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 HLA-DQB2P05538 268 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 TCP1P17987 556 aaKnown RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CASQ1P31415 396 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 ST8SIA6P61647 398 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CAMK2GQ13555 558 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 OASLQ15646 514 aaKnown RBP16.56■□□□□ 0.24
LIMS2-217ENST00000545738 SLC45A4Q5BKX6 768 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 TMCO4Q5TGY1 634 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 DPY19L3Q6ZPD9 716 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 CACUL1Q86Y37 369 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 LRRC49Q8IUZ0 686 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 SPEM1Q8N4L4 309 aa16.56■□□□□ 0.24
LIMS2-217ENST00000545738 TFB1MQ8WVM0 346 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms